Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Gm14497-201ENSMUST00000119537 580 ntBASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Gm25226-201ENSMUST00000158198 123 ntBASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Gm7069-201ENSMUST00000182418 1008 ntBASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Gm5599-201ENSMUST00000209602 788 ntBASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Gm4930-201ENSMUST00000219926 1087 ntBASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 AC138716.2-201ENSMUST00000226670 1016 ntBASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Gm4978-201ENSMUST00000071565 801 ntBASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Gm13204-201ENSMUST00000120110 821 ntBASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Gm9166-201ENSMUST00000120293 561 ntBASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Gm8197-202ENSMUST00000193422 934 ntBASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Gm45481-201ENSMUST00000209717 877 ntBASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 AC162932.1-201ENSMUST00000219209 872 ntBASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx2-4Q9EQM3 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms