Protein–RNA interactions for Protein: Q9D5U5

Pudp, Pseudouridine-5'-phosphatase, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PudpQ9D5U5 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.39□□□□□ -0.59
PudpQ9D5U5 Gm31256-201ENSMUST00000194705 506 ntBASIC11.39□□□□□ -0.59
PudpQ9D5U5 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
PudpQ9D5U5 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
PudpQ9D5U5 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.39□□□□□ -0.59
PudpQ9D5U5 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.39□□□□□ -0.59
PudpQ9D5U5 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PudpQ9D5U5 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PudpQ9D5U5 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
PudpQ9D5U5 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PudpQ9D5U5 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PudpQ9D5U5 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
PudpQ9D5U5 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PudpQ9D5U5 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
PudpQ9D5U5 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
PudpQ9D5U5 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
PudpQ9D5U5 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
PudpQ9D5U5 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
PudpQ9D5U5 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
PudpQ9D5U5 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
PudpQ9D5U5 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
PudpQ9D5U5 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.39□□□□□ -0.59
PudpQ9D5U5 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
PudpQ9D5U5 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
PudpQ9D5U5 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.38□□□□□ -0.59
PudpQ9D5U5 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PudpQ9D5U5 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.38□□□□□ -0.59
PudpQ9D5U5 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PudpQ9D5U5 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
PudpQ9D5U5 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PudpQ9D5U5 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PudpQ9D5U5 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PudpQ9D5U5 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PudpQ9D5U5 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
PudpQ9D5U5 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.38□□□□□ -0.59
PudpQ9D5U5 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PudpQ9D5U5 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.38□□□□□ -0.59
PudpQ9D5U5 Gm15703-201ENSMUST00000120250 880 ntBASIC11.38□□□□□ -0.59
PudpQ9D5U5 Gm14726-201ENSMUST00000120623 896 ntBASIC11.38□□□□□ -0.59
PudpQ9D5U5 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.38□□□□□ -0.59
PudpQ9D5U5 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PudpQ9D5U5 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PudpQ9D5U5 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.38□□□□□ -0.59
PudpQ9D5U5 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.38□□□□□ -0.59
PudpQ9D5U5 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.38□□□□□ -0.59
PudpQ9D5U5 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PudpQ9D5U5 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.38□□□□□ -0.59
PudpQ9D5U5 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PudpQ9D5U5 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.38□□□□□ -0.59
PudpQ9D5U5 Gm5950-201ENSMUST00000213337 772 ntBASIC11.38□□□□□ -0.59
PudpQ9D5U5 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PudpQ9D5U5 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PudpQ9D5U5 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
PudpQ9D5U5 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.38□□□□□ -0.59
PudpQ9D5U5 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PudpQ9D5U5 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
PudpQ9D5U5 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PudpQ9D5U5 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
PudpQ9D5U5 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
PudpQ9D5U5 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PudpQ9D5U5 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
PudpQ9D5U5 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PudpQ9D5U5 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PudpQ9D5U5 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PudpQ9D5U5 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PudpQ9D5U5 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PudpQ9D5U5 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PudpQ9D5U5 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PudpQ9D5U5 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
PudpQ9D5U5 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
PudpQ9D5U5 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
PudpQ9D5U5 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
PudpQ9D5U5 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PudpQ9D5U5 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
PudpQ9D5U5 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PudpQ9D5U5 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
PudpQ9D5U5 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PudpQ9D5U5 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PudpQ9D5U5 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PudpQ9D5U5 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
PudpQ9D5U5 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
PudpQ9D5U5 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PudpQ9D5U5 Gm24255-201ENSMUST00000104481 128 ntBASIC11.37□□□□□ -0.59
PudpQ9D5U5 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
PudpQ9D5U5 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
PudpQ9D5U5 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
PudpQ9D5U5 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.37□□□□□ -0.59
PudpQ9D5U5 Gm25043-201ENSMUST00000158604 212 ntBASIC11.37□□□□□ -0.59
PudpQ9D5U5 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
PudpQ9D5U5 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.37□□□□□ -0.59
PudpQ9D5U5 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PudpQ9D5U5 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PudpQ9D5U5 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.37□□□□□ -0.59
PudpQ9D5U5 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PudpQ9D5U5 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
PudpQ9D5U5 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PudpQ9D5U5 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.37□□□□□ -0.59
PudpQ9D5U5 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
PudpQ9D5U5 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
PudpQ9D5U5 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms