Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf135Q9CWS1 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Gm14208-201ENSMUST00000119645 678 ntBASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Gm44262-201ENSMUST00000204969 372 ntBASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Gm8385-201ENSMUST00000058999 643 ntBASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf135Q9CWS1 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms