Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf111Q99ML9 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Gm24255-201ENSMUST00000104481 128 ntBASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Rprl1-201ENSMUST00000158050 327 ntBASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Gm7783-201ENSMUST00000204795 781 ntBASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Gm19994-201ENSMUST00000217086 586 ntBASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.41□□□□□ -0.58
Rnf111Q99ML9 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Gm14109-201ENSMUST00000118814 309 ntBASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Gm20482-202ENSMUST00000174729 825 ntBASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Mir3102-201ENSMUST00000175555 104 ntBASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Gm18711-201ENSMUST00000199341 750 ntBASIC11.4□□□□□ -0.58
Rnf111Q99ML9 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Gzmn-202ENSMUST00000225535 989 ntBASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms