Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Gm8731-201ENSMUST00000118088 412 ntBASIC11.34□□□□□ -0.59
Rab28Q99KL7 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.34□□□□□ -0.59
Rab28Q99KL7 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.34□□□□□ -0.59
Rab28Q99KL7 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.34□□□□□ -0.59
Rab28Q99KL7 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab28Q99KL7 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rab28Q99KL7 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Rab28Q99KL7 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.34□□□□□ -0.59
Rab28Q99KL7 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.34□□□□□ -0.59
Rab28Q99KL7 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.34□□□□□ -0.59
Rab28Q99KL7 Gm9540-201ENSMUST00000188230 478 ntBASIC11.34□□□□□ -0.59
Rab28Q99KL7 Gm10774-201ENSMUST00000188689 204 ntBASIC11.34□□□□□ -0.59
Rab28Q99KL7 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.34□□□□□ -0.59
Rab28Q99KL7 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.34□□□□□ -0.59
Rab28Q99KL7 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
Rab28Q99KL7 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rab28Q99KL7 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab28Q99KL7 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab28Q99KL7 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab28Q99KL7 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Rab28Q99KL7 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rab28Q99KL7 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rab28Q99KL7 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab28Q99KL7 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rab28Q99KL7 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Rab28Q99KL7 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.34□□□□□ -0.59
Rab28Q99KL7 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab28Q99KL7 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Rab28Q99KL7 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab28Q99KL7 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab28Q99KL7 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rab28Q99KL7 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rab28Q99KL7 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab28Q99KL7 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab28Q99KL7 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab28Q99KL7 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Rab28Q99KL7 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Rab28Q99KL7 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab28Q99KL7 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab28Q99KL7 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
Rab28Q99KL7 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Rab28Q99KL7 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
Rab28Q99KL7 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Gm11331-201ENSMUST00000119764 288 ntBASIC11.33□□□□□ -0.6
Rab28Q99KL7 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Gm10807-201ENSMUST00000177134 795 ntBASIC11.33□□□□□ -0.6
Rab28Q99KL7 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Gm37835-201ENSMUST00000193305 361 ntBASIC11.33□□□□□ -0.6
Rab28Q99KL7 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Gm9555-201ENSMUST00000200908 583 ntBASIC11.33□□□□□ -0.6
Rab28Q99KL7 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Gm18065-201ENSMUST00000221395 526 ntBASIC11.33□□□□□ -0.6
Rab28Q99KL7 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.33□□□□□ -0.6
Rab28Q99KL7 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab28Q99KL7 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab28Q99KL7 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rab28Q99KL7 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms