Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.64□□□□□ -0.39
TraipQ8VIG6 Gm44980-201ENSMUST00000205826 314 ntBASIC12.64□□□□□ -0.39
TraipQ8VIG6 Gm2517-201ENSMUST00000215651 348 ntBASIC12.64□□□□□ -0.39
TraipQ8VIG6 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.64□□□□□ -0.39
TraipQ8VIG6 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TraipQ8VIG6 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TraipQ8VIG6 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.63□□□□□ -0.39
TraipQ8VIG6 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Gm14942-201ENSMUST00000119642 336 ntBASIC12.63□□□□□ -0.39
TraipQ8VIG6 Gm7150-201ENSMUST00000122032 981 ntBASIC12.63□□□□□ -0.39
TraipQ8VIG6 Gm14665-201ENSMUST00000122294 557 ntBASIC12.63□□□□□ -0.39
TraipQ8VIG6 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TraipQ8VIG6 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Gm23771-201ENSMUST00000178702 110 ntBASIC12.63□□□□□ -0.39
TraipQ8VIG6 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Gm37299-201ENSMUST00000193951 826 ntBASIC12.63□□□□□ -0.39
TraipQ8VIG6 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.63□□□□□ -0.39
TraipQ8VIG6 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.63□□□□□ -0.39
TraipQ8VIG6 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.63□□□□□ -0.39
TraipQ8VIG6 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.63□□□□□ -0.39
TraipQ8VIG6 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.63□□□□□ -0.39
TraipQ8VIG6 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.63□□□□□ -0.39
TraipQ8VIG6 Gm15398-202ENSMUST00000219998 1477 ntTSL 5 BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TraipQ8VIG6 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TraipQ8VIG6 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TraipQ8VIG6 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.62□□□□□ -0.39
TraipQ8VIG6 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TraipQ8VIG6 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TraipQ8VIG6 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TraipQ8VIG6 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.62□□□□□ -0.39
TraipQ8VIG6 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TraipQ8VIG6 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TraipQ8VIG6 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TraipQ8VIG6 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TraipQ8VIG6 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
TraipQ8VIG6 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TraipQ8VIG6 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TraipQ8VIG6 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.62□□□□□ -0.39
TraipQ8VIG6 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.62□□□□□ -0.39
TraipQ8VIG6 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TraipQ8VIG6 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TraipQ8VIG6 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TraipQ8VIG6 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TraipQ8VIG6 Gm42462-201ENSMUST00000196543 1363 ntBASIC12.62□□□□□ -0.39
TraipQ8VIG6 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.62□□□□□ -0.39
TraipQ8VIG6 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TraipQ8VIG6 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.62□□□□□ -0.39
TraipQ8VIG6 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TraipQ8VIG6 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TraipQ8VIG6 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TraipQ8VIG6 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms