Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 Gm45643-201ENSMUST00000211364 1484 ntBASIC15.33■□□□□ 0.04
Ddx54Q8K4L0 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 Gm22937-201ENSMUST00000103954 131 ntBASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 Gm4294-201ENSMUST00000105169 614 ntBASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 Gm15707-201ENSMUST00000118804 996 ntBASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 Gm4982-201ENSMUST00000160440 1098 ntBASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 Gm37284-201ENSMUST00000193607 539 ntBASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 AC098716.1-201ENSMUST00000213527 703 ntBASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 Gm6641-201ENSMUST00000196100 1315 ntBASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ddx54Q8K4L0 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Gm45266-201ENSMUST00000210111 2173 ntBASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Gm13827-201ENSMUST00000148801 372 ntBASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Gm25569-201ENSMUST00000157175 131 ntBASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Gm36982-201ENSMUST00000193796 1128 ntBASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 AC164556.1-201ENSMUST00000221318 751 ntBASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Gm6564-201ENSMUST00000075377 619 ntBASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Gm6478-201ENSMUST00000099450 742 ntBASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Gm14005-210ENSMUST00000225087 1413 ntBASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Rab3c-202ENSMUST00000223922 2398 ntBASIC15.31■□□□□ 0.04
Ddx54Q8K4L0 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Gm15625-201ENSMUST00000117617 1093 ntBASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Gm12389-201ENSMUST00000117696 418 ntBASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Gm11475-201ENSMUST00000118482 476 ntBASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Gm15519-201ENSMUST00000120088 1566 ntBASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Gm15136-201ENSMUST00000120552 533 ntBASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Mir8093-201ENSMUST00000185043 137 ntBASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC15.3■□□□□ 0.04
Ddx54Q8K4L0 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms