Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Rfwd3Q8CIK8 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Gm14028-201ENSMUST00000117434 479 ntBASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Gm15711-201ENSMUST00000118889 535 ntBASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Gm15004-201ENSMUST00000119192 630 ntBASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Gm11660-201ENSMUST00000120955 412 ntBASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Mir7677-201ENSMUST00000184226 67 ntBASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Gm43184-201ENSMUST00000197247 542 ntBASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Gm5705-201ENSMUST00000066241 711 ntBASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rfwd3Q8CIK8 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Gm18730-201ENSMUST00000218038 343 ntBASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Rfwd3Q8CIK8 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 123.4 ms