Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.93□□□□□ -0.34
Trim9Q8C7M3 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Trim9Q8C7M3 Gm18212-201ENSMUST00000211678 889 ntBASIC12.93□□□□□ -0.34
Trim9Q8C7M3 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim9Q8C7M3 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim9Q8C7M3 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim9Q8C7M3 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim9Q8C7M3 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim9Q8C7M3 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim9Q8C7M3 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trim9Q8C7M3 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim9Q8C7M3 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim9Q8C7M3 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim9Q8C7M3 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim9Q8C7M3 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim9Q8C7M3 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trim9Q8C7M3 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.93□□□□□ -0.34
Trim9Q8C7M3 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.93□□□□□ -0.34
Trim9Q8C7M3 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trim9Q8C7M3 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim9Q8C7M3 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Gm11500-201ENSMUST00000118237 601 ntBASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Gm25881-201ENSMUST00000157783 103 ntBASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Gm6867-201ENSMUST00000219165 425 ntBASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Gm9257-201ENSMUST00000221254 232 ntBASIC12.92□□□□□ -0.34
Trim9Q8C7M3 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim9Q8C7M3 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Gm11783-201ENSMUST00000119549 885 ntBASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Gm8815-201ENSMUST00000173809 620 ntBASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Gm2965-201ENSMUST00000198365 343 ntBASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Gm45575-201ENSMUST00000210283 548 ntBASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Erich3-203ENSMUST00000189969 3460 ntBASIC12.91□□□□□ -0.34
Trim9Q8C7M3 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms