Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rpp38Q80UU2 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Gm7857-201ENSMUST00000117957 358 ntBASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Gm28450-201ENSMUST00000187349 638 ntBASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Gm38151-201ENSMUST00000195085 289 ntBASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Gm18056-201ENSMUST00000207670 568 ntBASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Gm18061-201ENSMUST00000208350 562 ntBASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Gm18063-201ENSMUST00000208529 568 ntBASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Gm18052-201ENSMUST00000208750 559 ntBASIC11.73□□□□□ -0.53
Rpp38Q80UU2 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpp38Q80UU2 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rpp38Q80UU2 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpp38Q80UU2 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpp38Q80UU2 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpp38Q80UU2 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rpp38Q80UU2 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpp38Q80UU2 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rpp38Q80UU2 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.72□□□□□ -0.53
Rpp38Q80UU2 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Rpp38Q80UU2 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.72□□□□□ -0.53
Rpp38Q80UU2 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rpp38Q80UU2 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpp38Q80UU2 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpp38Q80UU2 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rpp38Q80UU2 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpp38Q80UU2 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpp38Q80UU2 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rpp38Q80UU2 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpp38Q80UU2 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpp38Q80UU2 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Rpp38Q80UU2 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rpp38Q80UU2 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.72□□□□□ -0.53
Rpp38Q80UU2 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpp38Q80UU2 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpp38Q80UU2 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Rpp38Q80UU2 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rpp38Q80UU2 Gm23200-201ENSMUST00000104379 132 ntBASIC11.72□□□□□ -0.53
Rpp38Q80UU2 Gm24891-201ENSMUST00000104391 136 ntBASIC11.72□□□□□ -0.53
Rpp38Q80UU2 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpp38Q80UU2 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpp38Q80UU2 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Rpp38Q80UU2 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Rpp38Q80UU2 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.72□□□□□ -0.53
Rpp38Q80UU2 Gm13461-201ENSMUST00000120980 662 ntBASIC11.72□□□□□ -0.53
Rpp38Q80UU2 Gm11450-201ENSMUST00000121144 333 ntBASIC11.72□□□□□ -0.53
Rpp38Q80UU2 Gm8199-201ENSMUST00000121323 823 ntBASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms