Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh8Q7TSK3 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Gm15207-201ENSMUST00000119259 442 ntBASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Gm15566-201ENSMUST00000121130 590 ntBASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Gm8815-201ENSMUST00000173809 620 ntBASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh8Q7TSK3 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Gm15881-201ENSMUST00000148792 942 ntBASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Gm17391-201ENSMUST00000171036 126 ntBASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Gm5706-201ENSMUST00000181525 993 ntBASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms