Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chd4Q6PDQ2 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC15.07■□□□□ 0
Chd4Q6PDQ2 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chd4Q6PDQ2 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd4Q6PDQ2 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chd4Q6PDQ2 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chd4Q6PDQ2 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd4Q6PDQ2 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd4Q6PDQ2 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Chd4Q6PDQ2 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.07■□□□□ 0
Chd4Q6PDQ2 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd4Q6PDQ2 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd4Q6PDQ2 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chd4Q6PDQ2 Gm19246-201ENSMUST00000173599 255 ntBASIC15.07■□□□□ 0
Chd4Q6PDQ2 Gm9081-201ENSMUST00000182346 991 ntBASIC15.07■□□□□ 0
Chd4Q6PDQ2 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC15.07■□□□□ 0
Chd4Q6PDQ2 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chd4Q6PDQ2 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Chd4Q6PDQ2 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd4Q6PDQ2 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC15.07■□□□□ 0
Chd4Q6PDQ2 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd4Q6PDQ2 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Chd4Q6PDQ2 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Chd4Q6PDQ2 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Chd4Q6PDQ2 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd4Q6PDQ2 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Chd4Q6PDQ2 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd4Q6PDQ2 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd4Q6PDQ2 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Chd4Q6PDQ2 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd4Q6PDQ2 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Chd4Q6PDQ2 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC15.06■□□□□ 0
Chd4Q6PDQ2 Gm15036-201ENSMUST00000118880 400 ntBASIC15.06■□□□□ 0
Chd4Q6PDQ2 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chd4Q6PDQ2 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC15.06■□□□□ 0
Chd4Q6PDQ2 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC15.06■□□□□ 0
Chd4Q6PDQ2 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd4Q6PDQ2 Gm16547-201ENSMUST00000159474 293 ntBASIC15.06■□□□□ 0
Chd4Q6PDQ2 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC15.06■□□□□ 0
Chd4Q6PDQ2 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC15.06■□□□□ 0
Chd4Q6PDQ2 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd4Q6PDQ2 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd4Q6PDQ2 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chd4Q6PDQ2 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd4Q6PDQ2 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC15.06■□□□□ 0
Chd4Q6PDQ2 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Chd4Q6PDQ2 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd4Q6PDQ2 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Chd4Q6PDQ2 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chd4Q6PDQ2 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC15.06■□□□□ 0
Chd4Q6PDQ2 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd4Q6PDQ2 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chd4Q6PDQ2 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd4Q6PDQ2 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC15.05■□□□□ 0
Chd4Q6PDQ2 Gm37852-201ENSMUST00000193027 350 ntBASIC15.05■□□□□ 0
Chd4Q6PDQ2 Gm43249-201ENSMUST00000200464 458 ntBASIC15.05■□□□□ 0
Chd4Q6PDQ2 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC15.05■□□□□ 0
Chd4Q6PDQ2 Gm45500-201ENSMUST00000211676 803 ntBASIC15.05■□□□□ 0
Chd4Q6PDQ2 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC15.05■□□□□ 0
Chd4Q6PDQ2 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chd4Q6PDQ2 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chd4Q6PDQ2 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC15.05■□□□□ 0
Chd4Q6PDQ2 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Chd4Q6PDQ2 Gm13135-201ENSMUST00000117628 3121 ntBASIC15.05■□□□□ 0
Chd4Q6PDQ2 Gm5740-201ENSMUST00000211003 1857 ntBASIC15.05■□□□□ 0
Chd4Q6PDQ2 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Chd4Q6PDQ2 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chd4Q6PDQ2 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC15.05■□□□□ 0
Chd4Q6PDQ2 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chd4Q6PDQ2 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chd4Q6PDQ2 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chd4Q6PDQ2 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chd4Q6PDQ2 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chd4Q6PDQ2 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chd4Q6PDQ2 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chd4Q6PDQ2 Gm44755-201ENSMUST00000207830 2102 ntBASIC15.05■□□□□ -0
Chd4Q6PDQ2 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chd4Q6PDQ2 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chd4Q6PDQ2 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC15.05■□□□□ -0
Chd4Q6PDQ2 Gm9133-201ENSMUST00000118289 540 ntBASIC15.05■□□□□ -0
Chd4Q6PDQ2 Gm25343-201ENSMUST00000157460 107 ntBASIC15.05■□□□□ -0
Chd4Q6PDQ2 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chd4Q6PDQ2 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC15.05■□□□□ -0
Chd4Q6PDQ2 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chd4Q6PDQ2 AC126799.1-201ENSMUST00000221976 246 ntBASIC15.05■□□□□ -0
Chd4Q6PDQ2 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chd4Q6PDQ2 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chd4Q6PDQ2 Gm25580-201ENSMUST00000083409 327 ntBASIC15.05■□□□□ -0
Chd4Q6PDQ2 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Chd4Q6PDQ2 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Chd4Q6PDQ2 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC15.05■□□□□ -0
Chd4Q6PDQ2 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chd4Q6PDQ2 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC15.05■□□□□ -0
Chd4Q6PDQ2 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chd4Q6PDQ2 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC15.05■□□□□ -0
Chd4Q6PDQ2 Gm37651-201ENSMUST00000194679 1494 ntBASIC15.05■□□□□ -0
Chd4Q6PDQ2 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chd4Q6PDQ2 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chd4Q6PDQ2 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.04■□□□□ -0
Chd4Q6PDQ2 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms