Protein–RNA interactions for Protein: Q6PDM2

Srsf1, Serine/arginine-rich splicing factor 1, mousemouse

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srsf1Q6PDM2 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Srsf1Q6PDM2 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Srsf1Q6PDM2 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Srsf1Q6PDM2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Srsf1Q6PDM2 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Srsf1Q6PDM2 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Srsf1Q6PDM2 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Srsf1Q6PDM2 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC10.21□□□□□ -0.78
Srsf1Q6PDM2 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.21□□□□□ -0.78
Srsf1Q6PDM2 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Srsf1Q6PDM2 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Srsf1Q6PDM2 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Srsf1Q6PDM2 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Srsf1Q6PDM2 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Srsf1Q6PDM2 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Srsf1Q6PDM2 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Srsf1Q6PDM2 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Srsf1Q6PDM2 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.21□□□□□ -0.78
Srsf1Q6PDM2 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Srsf1Q6PDM2 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Srsf1Q6PDM2 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Gm15707-201ENSMUST00000118804 996 ntBASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Gm15815-201ENSMUST00000120569 255 ntBASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Gm11244-201ENSMUST00000121243 237 ntBASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Gm13981-201ENSMUST00000122360 447 ntBASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Gm9924-202ENSMUST00000192760 2311 ntBASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Gm34379-201ENSMUST00000195036 290 ntBASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Gm42432-201ENSMUST00000197902 1617 ntBASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Gm42655-201ENSMUST00000202782 1134 ntBASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 AC152169.1-201ENSMUST00000223901 701 ntBASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Rps3a2-201ENSMUST00000074245 792 ntBASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Rps3a3-201ENSMUST00000074680 795 ntBASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.2□□□□□ -0.78
Srsf1Q6PDM2 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Srsf1Q6PDM2 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Srsf1Q6PDM2 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Srsf1Q6PDM2 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Srsf1Q6PDM2 Gm42706-201ENSMUST00000199733 1910 ntBASIC10.19□□□□□ -0.78
Srsf1Q6PDM2 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.19□□□□□ -0.78
Srsf1Q6PDM2 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
Srsf1Q6PDM2 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Srsf1Q6PDM2 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Srsf1Q6PDM2 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Srsf1Q6PDM2 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Srsf1Q6PDM2 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Srsf1Q6PDM2 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Srsf1Q6PDM2 Gm45638-201ENSMUST00000211507 2878 ntBASIC10.19□□□□□ -0.78
Srsf1Q6PDM2 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC10.19□□□□□ -0.78
Srsf1Q6PDM2 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Srsf1Q6PDM2 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Srsf1Q6PDM2 AC158636.1-201ENSMUST00000220118 1393 ntBASIC10.19□□□□□ -0.78
Srsf1Q6PDM2 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Srsf1Q6PDM2 Gm8899-201ENSMUST00000214635 1332 ntBASIC10.19□□□□□ -0.78
Srsf1Q6PDM2 Gm23769-201ENSMUST00000104441 121 ntBASIC10.19□□□□□ -0.78
Srsf1Q6PDM2 Gm23912-201ENSMUST00000104687 87 ntBASIC10.19□□□□□ -0.78
Srsf1Q6PDM2 Gm13281-201ENSMUST00000120871 567 ntBASIC10.19□□□□□ -0.78
Srsf1Q6PDM2 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC10.19□□□□□ -0.78
Srsf1Q6PDM2 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Srsf1Q6PDM2 Gm25830-201ENSMUST00000158923 132 ntBASIC10.19□□□□□ -0.78
Srsf1Q6PDM2 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Srsf1Q6PDM2 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC10.19□□□□□ -0.78
Srsf1Q6PDM2 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC10.19□□□□□ -0.78
Srsf1Q6PDM2 Gm7939-201ENSMUST00000201233 1050 ntBASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms