Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sdc3Q64519 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sdc3Q64519 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.35□□□□□ -0.59
Sdc3Q64519 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Sdc3Q64519 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sdc3Q64519 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sdc3Q64519 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sdc3Q64519 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.35□□□□□ -0.59
Sdc3Q64519 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Sdc3Q64519 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sdc3Q64519 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.34□□□□□ -0.59
Sdc3Q64519 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sdc3Q64519 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sdc3Q64519 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sdc3Q64519 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sdc3Q64519 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.34□□□□□ -0.59
Sdc3Q64519 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sdc3Q64519 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sdc3Q64519 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sdc3Q64519 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.34□□□□□ -0.59
Sdc3Q64519 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sdc3Q64519 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sdc3Q64519 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Sdc3Q64519 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sdc3Q64519 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sdc3Q64519 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sdc3Q64519 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.34□□□□□ -0.59
Sdc3Q64519 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sdc3Q64519 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.34□□□□□ -0.59
Sdc3Q64519 Gm12176-201ENSMUST00000121420 875 ntBASIC11.34□□□□□ -0.59
Sdc3Q64519 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sdc3Q64519 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.34□□□□□ -0.59
Sdc3Q64519 Gm22902-201ENSMUST00000158488 302 ntBASIC11.34□□□□□ -0.59
Sdc3Q64519 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.34□□□□□ -0.59
Sdc3Q64519 Gm18893-201ENSMUST00000198416 943 ntBASIC11.34□□□□□ -0.59
Sdc3Q64519 Gm42997-202ENSMUST00000200321 985 ntBASIC11.34□□□□□ -0.59
Sdc3Q64519 Gm8956-201ENSMUST00000203939 825 ntBASIC11.34□□□□□ -0.59
Sdc3Q64519 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sdc3Q64519 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.34□□□□□ -0.59
Sdc3Q64519 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.34□□□□□ -0.59
Sdc3Q64519 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sdc3Q64519 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sdc3Q64519 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sdc3Q64519 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sdc3Q64519 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sdc3Q64519 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.34□□□□□ -0.59
Sdc3Q64519 Gm21811-201ENSMUST00000096485 930 ntBASIC11.34□□□□□ -0.59
Sdc3Q64519 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sdc3Q64519 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sdc3Q64519 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sdc3Q64519 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sdc3Q64519 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sdc3Q64519 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sdc3Q64519 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sdc3Q64519 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sdc3Q64519 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sdc3Q64519 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sdc3Q64519 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.34□□□□□ -0.59
Sdc3Q64519 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.34□□□□□ -0.59
Sdc3Q64519 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sdc3Q64519 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sdc3Q64519 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.34□□□□□ -0.59
Sdc3Q64519 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sdc3Q64519 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sdc3Q64519 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sdc3Q64519 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sdc3Q64519 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sdc3Q64519 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Sdc3Q64519 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.34□□□□□ -0.59
Sdc3Q64519 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Sdc3Q64519 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Sdc3Q64519 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Sdc3Q64519 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Sdc3Q64519 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Sdc3Q64519 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.33□□□□□ -0.6
Sdc3Q64519 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sdc3Q64519 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sdc3Q64519 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sdc3Q64519 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sdc3Q64519 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sdc3Q64519 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sdc3Q64519 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sdc3Q64519 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Sdc3Q64519 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sdc3Q64519 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Sdc3Q64519 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.33□□□□□ -0.6
Sdc3Q64519 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sdc3Q64519 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sdc3Q64519 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Sdc3Q64519 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sdc3Q64519 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Sdc3Q64519 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.33□□□□□ -0.6
Sdc3Q64519 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.33□□□□□ -0.6
Sdc3Q64519 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.33□□□□□ -0.6
Sdc3Q64519 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.33□□□□□ -0.6
Sdc3Q64519 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Sdc3Q64519 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sdc3Q64519 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.33□□□□□ -0.6
Sdc3Q64519 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.33□□□□□ -0.6
Sdc3Q64519 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms