Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Gli3Q61602 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gli3Q61602 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC15.43■□□□□ 0.06
Gli3Q61602 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gli3Q61602 Gm7002-201ENSMUST00000221386 2165 ntBASIC15.43■□□□□ 0.06
Gli3Q61602 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Gli3Q61602 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gli3Q61602 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Gli3Q61602 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC15.43■□□□□ 0.06
Gli3Q61602 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gli3Q61602 Gm24161-201ENSMUST00000104592 130 ntBASIC15.43■□□□□ 0.06
Gli3Q61602 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC15.43■□□□□ 0.06
Gli3Q61602 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC15.43■□□□□ 0.06
Gli3Q61602 Gm22662-201ENSMUST00000175290 256 ntBASIC15.43■□□□□ 0.06
Gli3Q61602 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC15.43■□□□□ 0.06
Gli3Q61602 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC15.43■□□□□ 0.06
Gli3Q61602 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC15.43■□□□□ 0.06
Gli3Q61602 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Gli3Q61602 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Gli3Q61602 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gli3Q61602 Gm6653-201ENSMUST00000218063 1288 ntBASIC15.43■□□□□ 0.06
Gli3Q61602 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gli3Q61602 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gli3Q61602 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Gli3Q61602 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gli3Q61602 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gli3Q61602 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Gli3Q61602 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Gli3Q61602 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gli3Q61602 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Gli3Q61602 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gli3Q61602 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gli3Q61602 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Gli3Q61602 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Gli3Q61602 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gli3Q61602 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Gli3Q61602 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gli3Q61602 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gli3Q61602 Epp13-201ENSMUST00000121024 957 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Gli3Q61602 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Gli3Q61602 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Gli3Q61602 Mir8091-201ENSMUST00000183602 139 ntBASIC15.42■□□□□ 0.06
Gli3Q61602 Ighv1-60-201ENSMUST00000195816 405 ntBASIC15.42■□□□□ 0.06
Gli3Q61602 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC15.42■□□□□ 0.06
Gli3Q61602 Gm45745-201ENSMUST00000211447 1180 ntBASIC15.42■□□□□ 0.06
Gli3Q61602 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gli3Q61602 AC192333.3-201ENSMUST00000224041 463 ntBASIC15.42■□□□□ 0.06
Gli3Q61602 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gli3Q61602 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gli3Q61602 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gli3Q61602 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC15.42■□□□□ 0.06
Gli3Q61602 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
Gli3Q61602 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Gli3Q61602 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gli3Q61602 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gli3Q61602 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gli3Q61602 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Gli3Q61602 AC122273.1-201ENSMUST00000213634 2327 ntBASIC15.42■□□□□ 0.06
Gli3Q61602 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gli3Q61602 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gli3Q61602 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Gli3Q61602 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gli3Q61602 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Gli3Q61602 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Gli3Q61602 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gli3Q61602 Gm28424-201ENSMUST00000187393 1319 ntBASIC15.42■□□□□ 0.06
Gli3Q61602 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Gli3Q61602 AC151836.1-201ENSMUST00000228730 1637 ntBASIC15.42■□□□□ 0.06
Gli3Q61602 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC15.41■□□□□ 0.06
Gli3Q61602 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC15.41■□□□□ 0.06
Gli3Q61602 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Gli3Q61602 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Gli3Q61602 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC15.41■□□□□ 0.06
Gli3Q61602 Tspy-ps-203ENSMUST00000186546 989 ntBASIC15.41■□□□□ 0.06
Gli3Q61602 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC15.41■□□□□ 0.06
Gli3Q61602 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC15.41■□□□□ 0.06
Gli3Q61602 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC15.41■□□□□ 0.06
Gli3Q61602 Gm3945-201ENSMUST00000196637 683 ntBASIC15.41■□□□□ 0.06
Gli3Q61602 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gli3Q61602 Gm39147-202ENSMUST00000211730 882 ntTSL 5 BASIC15.41■□□□□ 0.06
Gli3Q61602 AC122891.1-201ENSMUST00000218671 268 ntBASIC15.41■□□□□ 0.06
Gli3Q61602 AC127583.1-201ENSMUST00000224351 540 ntBASIC15.41■□□□□ 0.06
Gli3Q61602 AC165260.2-201ENSMUST00000225371 395 ntBASIC15.41■□□□□ 0.06
Gli3Q61602 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gli3Q61602 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gli3Q61602 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gli3Q61602 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.41■□□□□ 0.06
Gli3Q61602 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gli3Q61602 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gli3Q61602 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gli3Q61602 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gli3Q61602 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gli3Q61602 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gli3Q61602 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gli3Q61602 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gli3Q61602 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gli3Q61602 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gli3Q61602 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gli3Q61602 Gm14153-201ENSMUST00000119923 1139 ntBASIC15.41■□□□□ 0.06
Gli3Q61602 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms