Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Gm12030-201ENSMUST00000121917 223 ntBASIC13.73□□□□□ -0.21
Ddx49Q4FZF3 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx49Q4FZF3 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ddx49Q4FZF3 Mir6923-201ENSMUST00000184592 72 ntBASIC13.73□□□□□ -0.21
Ddx49Q4FZF3 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC13.73□□□□□ -0.21
Ddx49Q4FZF3 AC140375.1-201ENSMUST00000225421 694 ntBASIC13.73□□□□□ -0.21
Ddx49Q4FZF3 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx49Q4FZF3 Gm5805-201ENSMUST00000072779 456 ntBASIC13.73□□□□□ -0.21
Ddx49Q4FZF3 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ddx49Q4FZF3 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
Ddx49Q4FZF3 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx49Q4FZF3 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx49Q4FZF3 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC13.73□□□□□ -0.21
Ddx49Q4FZF3 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx49Q4FZF3 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx49Q4FZF3 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx49Q4FZF3 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx49Q4FZF3 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ddx49Q4FZF3 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.73□□□□□ -0.21
Ddx49Q4FZF3 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ddx49Q4FZF3 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ddx49Q4FZF3 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Gm4862-201ENSMUST00000170405 438 ntBASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Gm37981-201ENSMUST00000194280 535 ntBASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Gm38151-201ENSMUST00000195085 289 ntBASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Gm44315-201ENSMUST00000203041 219 ntBASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Gm18463-201ENSMUST00000207258 474 ntBASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Gm7959-201ENSMUST00000221823 1078 ntBASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Olfr584-201ENSMUST00000098210 964 ntBASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ddx49Q4FZF3 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Gm23272-201ENSMUST00000104053 129 ntBASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Gm5706-201ENSMUST00000181525 993 ntBASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Gm45113-201ENSMUST00000207518 165 ntBASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Gm4604-201ENSMUST00000025040 390 ntBASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Gm15784-201ENSMUST00000120260 1462 ntBASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ddx49Q4FZF3 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms