Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Gm7504-201ENSMUST00000201449 424 ntBASIC11.86□□□□□ -0.51
Fam196aQ3USH1 Gm44882-201ENSMUST00000205702 802 ntBASIC11.86□□□□□ -0.51
Fam196aQ3USH1 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC11.86□□□□□ -0.51
Fam196aQ3USH1 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Fam196aQ3USH1 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fam196aQ3USH1 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fam196aQ3USH1 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Fam196aQ3USH1 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fam196aQ3USH1 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Fam196aQ3USH1 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Fam196aQ3USH1 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fam196aQ3USH1 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fam196aQ3USH1 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Fam196aQ3USH1 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Fam196aQ3USH1 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fam196aQ3USH1 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fam196aQ3USH1 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fam196aQ3USH1 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fam196aQ3USH1 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fam196aQ3USH1 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam196aQ3USH1 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Mir453-201ENSMUST00000104732 82 ntBASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Mir432-201ENSMUST00000157230 75 ntBASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Gm10807-201ENSMUST00000177134 795 ntBASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.85□□□□□ -0.51
Fam196aQ3USH1 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.85□□□□□ -0.51
Fam196aQ3USH1 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Gm5468-202ENSMUST00000227851 682 ntBASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam196aQ3USH1 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fam196aQ3USH1 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Gm23612-201ENSMUST00000103823 110 ntBASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Gm13286-201ENSMUST00000117750 537 ntBASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Gm15196-201ENSMUST00000121406 482 ntBASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Gm13981-201ENSMUST00000122360 447 ntBASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Gm26272-201ENSMUST00000179241 132 ntBASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Gm23576-201ENSMUST00000179918 110 ntBASIC11.84□□□□□ -0.51
Fam196aQ3USH1 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fam196aQ3USH1 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms