Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ebf1Q07802 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.96□□□□□ -0.5
Ebf1Q07802 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.96□□□□□ -0.5
Ebf1Q07802 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ebf1Q07802 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.96□□□□□ -0.5
Ebf1Q07802 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf1Q07802 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ebf1Q07802 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.95□□□□□ -0.5
Ebf1Q07802 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.95□□□□□ -0.5
Ebf1Q07802 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf1Q07802 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf1Q07802 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf1Q07802 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf1Q07802 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.95□□□□□ -0.5
Ebf1Q07802 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.95□□□□□ -0.5
Ebf1Q07802 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.95□□□□□ -0.5
Ebf1Q07802 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf1Q07802 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Ebf1Q07802 Gm14193-201ENSMUST00000105067 153 ntBASIC11.95□□□□□ -0.5
Ebf1Q07802 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf1Q07802 Gm14247-201ENSMUST00000120950 237 ntBASIC11.95□□□□□ -0.5
Ebf1Q07802 Gm15566-201ENSMUST00000121130 590 ntBASIC11.95□□□□□ -0.5
Ebf1Q07802 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Ebf1Q07802 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.95□□□□□ -0.5
Ebf1Q07802 Gm44980-201ENSMUST00000205826 314 ntBASIC11.95□□□□□ -0.5
Ebf1Q07802 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC11.95□□□□□ -0.5
Ebf1Q07802 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf1Q07802 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.95□□□□□ -0.5
Ebf1Q07802 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf1Q07802 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf1Q07802 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf1Q07802 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf1Q07802 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ebf1Q07802 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf1Q07802 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.95□□□□□ -0.5
Ebf1Q07802 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf1Q07802 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ebf1Q07802 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf1Q07802 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf1Q07802 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf1Q07802 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.95□□□□□ -0.5
Ebf1Q07802 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf1Q07802 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf1Q07802 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf1Q07802 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf1Q07802 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Ebf1Q07802 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf1Q07802 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf1Q07802 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf1Q07802 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf1Q07802 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.94□□□□□ -0.5
Ebf1Q07802 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf1Q07802 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf1Q07802 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.94□□□□□ -0.5
Ebf1Q07802 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf1Q07802 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf1Q07802 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.94□□□□□ -0.5
Ebf1Q07802 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.94□□□□□ -0.5
Ebf1Q07802 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf1Q07802 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf1Q07802 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.94□□□□□ -0.5
Ebf1Q07802 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf1Q07802 Gm11949-201ENSMUST00000117640 372 ntBASIC11.94□□□□□ -0.5
Ebf1Q07802 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC11.94□□□□□ -0.5
Ebf1Q07802 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf1Q07802 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.94□□□□□ -0.5
Ebf1Q07802 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC11.94□□□□□ -0.5
Ebf1Q07802 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.94□□□□□ -0.5
Ebf1Q07802 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf1Q07802 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf1Q07802 Mir6998-201ENSMUST00000183343 64 ntBASIC11.94□□□□□ -0.5
Ebf1Q07802 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.94□□□□□ -0.5
Ebf1Q07802 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.94□□□□□ -0.5
Ebf1Q07802 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC11.94□□□□□ -0.5
Ebf1Q07802 Gm3028-201ENSMUST00000213805 1119 ntBASIC11.94□□□□□ -0.5
Ebf1Q07802 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf1Q07802 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf1Q07802 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ebf1Q07802 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf1Q07802 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf1Q07802 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf1Q07802 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf1Q07802 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf1Q07802 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf1Q07802 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ebf1Q07802 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Ebf1Q07802 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf1Q07802 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf1Q07802 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf1Q07802 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ebf1Q07802 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.93□□□□□ -0.5
Ebf1Q07802 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf1Q07802 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf1Q07802 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf1Q07802 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf1Q07802 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf1Q07802 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.93□□□□□ -0.5
Ebf1Q07802 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf1Q07802 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ebf1Q07802 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms