Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm27839-201ENSMUST00000184242 106 ntBASIC10.73□□□□□ -0.69
Scn1bP97952 Gm5896-201ENSMUST00000189662 1024 ntBASIC10.73□□□□□ -0.69
Scn1bP97952 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.73□□□□□ -0.69
Scn1bP97952 Gm7067-201ENSMUST00000207698 1249 ntBASIC10.73□□□□□ -0.69
Scn1bP97952 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scn1bP97952 Cdk7-205ENSMUST00000225990 1159 ntBASIC10.73□□□□□ -0.69
Scn1bP97952 Wdyhv1-206ENSMUST00000227142 786 ntBASIC10.73□□□□□ -0.69
Scn1bP97952 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scn1bP97952 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Scn1bP97952 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scn1bP97952 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC10.73□□□□□ -0.69
Scn1bP97952 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scn1bP97952 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scn1bP97952 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Scn1bP97952 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scn1bP97952 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Scn1bP97952 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Scn1bP97952 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scn1bP97952 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Scn1bP97952 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scn1bP97952 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scn1bP97952 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Scn1bP97952 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
Scn1bP97952 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scn1bP97952 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Scn1bP97952 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scn1bP97952 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scn1bP97952 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
Scn1bP97952 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Scn1bP97952 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scn1bP97952 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Scn1bP97952 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scn1bP97952 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scn1bP97952 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Scn1bP97952 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Scn1bP97952 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Scn1bP97952 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scn1bP97952 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scn1bP97952 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Scn1bP97952 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scn1bP97952 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Scn1bP97952 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.72□□□□□ -0.69
Scn1bP97952 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scn1bP97952 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Scn1bP97952 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Scn1bP97952 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scn1bP97952 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC10.72□□□□□ -0.69
Scn1bP97952 Gm12490-201ENSMUST00000120255 560 ntBASIC10.72□□□□□ -0.69
Scn1bP97952 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC10.72□□□□□ -0.69
Scn1bP97952 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scn1bP97952 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Scn1bP97952 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC10.72□□□□□ -0.69
Scn1bP97952 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scn1bP97952 Gm37497-201ENSMUST00000195830 798 ntBASIC10.72□□□□□ -0.69
Scn1bP97952 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Scn1bP97952 Gm44799-201ENSMUST00000207639 1202 ntBASIC10.72□□□□□ -0.69
Scn1bP97952 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scn1bP97952 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scn1bP97952 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scn1bP97952 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Scn1bP97952 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Scn1bP97952 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scn1bP97952 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Scn1bP97952 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Scn1bP97952 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scn1bP97952 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scn1bP97952 Gm13127-201ENSMUST00000118978 1389 ntBASIC10.72□□□□□ -0.69
Scn1bP97952 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Scn1bP97952 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.72□□□□□ -0.69
Scn1bP97952 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.72□□□□□ -0.69
Scn1bP97952 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scn1bP97952 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Scn1bP97952 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Scn1bP97952 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Scn1bP97952 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scn1bP97952 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Scn1bP97952 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Scn1bP97952 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.72□□□□□ -0.69
Scn1bP97952 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scn1bP97952 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Scn1bP97952 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Scn1bP97952 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Scn1bP97952 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Scn1bP97952 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Scn1bP97952 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Scn1bP97952 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.71□□□□□ -0.69
Scn1bP97952 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Scn1bP97952 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
Scn1bP97952 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Scn1bP97952 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Scn1bP97952 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Scn1bP97952 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Scn1bP97952 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Scn1bP97952 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Scn1bP97952 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Scn1bP97952 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.71□□□□□ -0.69
Scn1bP97952 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.71□□□□□ -0.69
Scn1bP97952 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.71□□□□□ -0.69
Scn1bP97952 Gm13050-201ENSMUST00000122149 1345 ntBASIC10.71□□□□□ -0.69
Scn1bP97952 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms