Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.89□□□□□ -0.67
Cacna1aP97445 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cacna1aP97445 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Cacna1aP97445 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cacna1aP97445 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.89□□□□□ -0.67
Cacna1aP97445 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cacna1aP97445 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.88□□□□□ -0.67
Cacna1aP97445 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Cacna1aP97445 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.88□□□□□ -0.67
Cacna1aP97445 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.88□□□□□ -0.67
Cacna1aP97445 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.88□□□□□ -0.67
Cacna1aP97445 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Cacna1aP97445 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Gm25063-201ENSMUST00000104666 94 ntBASIC10.88□□□□□ -0.67
Cacna1aP97445 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Gm8723-201ENSMUST00000166076 820 ntBASIC10.88□□□□□ -0.67
Cacna1aP97445 Gm8701-201ENSMUST00000169259 874 ntBASIC10.88□□□□□ -0.67
Cacna1aP97445 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC10.88□□□□□ -0.67
Cacna1aP97445 Gm18776-201ENSMUST00000188833 654 ntBASIC10.88□□□□□ -0.67
Cacna1aP97445 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.88□□□□□ -0.67
Cacna1aP97445 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 AC105408.1-201ENSMUST00000227771 802 ntBASIC10.88□□□□□ -0.67
Cacna1aP97445 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Cacna1aP97445 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cacna1aP97445 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Cacna1aP97445 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cacna1aP97445 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Cacna1aP97445 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Cacna1aP97445 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Cacna1aP97445 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cacna1aP97445 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC10.88□□□□□ -0.67
Cacna1aP97445 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC10.88□□□□□ -0.67
Cacna1aP97445 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Cacna1aP97445 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Cacna1aP97445 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Cacna1aP97445 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Cacna1aP97445 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC10.88□□□□□ -0.67
Cacna1aP97445 AC121357.1-201ENSMUST00000227365 608 ntBASIC10.88□□□□□ -0.67
Cacna1aP97445 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Cacna1aP97445 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cacna1aP97445 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.88□□□□□ -0.67
Cacna1aP97445 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 Gm45706-201ENSMUST00000213063 2136 ntBASIC10.87□□□□□ -0.67
Cacna1aP97445 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Cacna1aP97445 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cacna1aP97445 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Cacna1aP97445 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC10.87□□□□□ -0.67
Cacna1aP97445 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 Gm2345-201ENSMUST00000193451 589 ntBASIC10.87□□□□□ -0.67
Cacna1aP97445 Gm8342-201ENSMUST00000209839 757 ntBASIC10.87□□□□□ -0.67
Cacna1aP97445 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.87□□□□□ -0.67
Cacna1aP97445 CT009546.1-201ENSMUST00000222573 1120 ntBASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms