Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim43cP86449 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43cP86449 Gm15207-201ENSMUST00000119259 442 ntBASIC12.77□□□□□ -0.37
Trim43cP86449 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim43cP86449 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43cP86449 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim43cP86449 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43cP86449 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.77□□□□□ -0.37
Trim43cP86449 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.77□□□□□ -0.37
Trim43cP86449 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43cP86449 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim43cP86449 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.77□□□□□ -0.37
Trim43cP86449 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Trim43cP86449 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim43cP86449 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim43cP86449 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43cP86449 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43cP86449 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43cP86449 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43cP86449 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43cP86449 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43cP86449 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43cP86449 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trim43cP86449 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43cP86449 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.77□□□□□ -0.37
Trim43cP86449 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trim43cP86449 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43cP86449 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Trim43cP86449 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim43cP86449 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim43cP86449 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim43cP86449 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.76□□□□□ -0.37
Trim43cP86449 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim43cP86449 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Gm11663-201ENSMUST00000117888 290 ntBASIC12.76□□□□□ -0.37
Trim43cP86449 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.76□□□□□ -0.37
Trim43cP86449 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.76□□□□□ -0.37
Trim43cP86449 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.76□□□□□ -0.37
Trim43cP86449 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Trim43cP86449 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Gm8459-201ENSMUST00000162504 760 ntBASIC12.76□□□□□ -0.37
Trim43cP86449 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.76□□□□□ -0.37
Trim43cP86449 Gm8100-201ENSMUST00000182906 988 ntBASIC12.76□□□□□ -0.37
Trim43cP86449 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.76□□□□□ -0.37
Trim43cP86449 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.76□□□□□ -0.37
Trim43cP86449 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.76□□□□□ -0.37
Trim43cP86449 Gm2965-201ENSMUST00000198365 343 ntBASIC12.76□□□□□ -0.37
Trim43cP86449 Gm4482-201ENSMUST00000200876 742 ntBASIC12.76□□□□□ -0.37
Trim43cP86449 Gm45575-201ENSMUST00000210283 548 ntBASIC12.76□□□□□ -0.37
Trim43cP86449 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.76□□□□□ -0.37
Trim43cP86449 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.76□□□□□ -0.37
Trim43cP86449 Gm18065-201ENSMUST00000221395 526 ntBASIC12.76□□□□□ -0.37
Trim43cP86449 Gm10254-201ENSMUST00000052888 867 ntBASIC12.76□□□□□ -0.37
Trim43cP86449 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.76□□□□□ -0.37
Trim43cP86449 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trim43cP86449 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.76□□□□□ -0.37
Trim43cP86449 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim43cP86449 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim43cP86449 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim43cP86449 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim43cP86449 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim43cP86449 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43cP86449 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43cP86449 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43cP86449 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43cP86449 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trim43cP86449 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms