Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC9.73□□□□□ -0.85
Nkx2-1P50220 Gm43931-201ENSMUST00000204817 2870 ntBASIC9.73□□□□□ -0.85
Nkx2-1P50220 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Gm13142-201ENSMUST00000117213 1453 ntBASIC9.72□□□□□ -0.85
Nkx2-1P50220 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Gm13736-201ENSMUST00000119272 253 ntBASIC9.72□□□□□ -0.85
Nkx2-1P50220 Gm11700-201ENSMUST00000119409 403 ntBASIC9.72□□□□□ -0.85
Nkx2-1P50220 Gm15610-201ENSMUST00000120584 195 ntBASIC9.72□□□□□ -0.85
Nkx2-1P50220 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Gm8835-201ENSMUST00000173096 1169 ntBASIC9.72□□□□□ -0.85
Nkx2-1P50220 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Gm27023-201ENSMUST00000182372 285 ntBASIC9.72□□□□□ -0.85
Nkx2-1P50220 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Gm38241-201ENSMUST00000192641 898 ntBASIC9.72□□□□□ -0.85
Nkx2-1P50220 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Gm17931-201ENSMUST00000208132 634 ntBASIC9.72□□□□□ -0.85
Nkx2-1P50220 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC9.72□□□□□ -0.85
Nkx2-1P50220 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Gm37648-201ENSMUST00000192072 2563 ntBASIC9.72□□□□□ -0.85
Nkx2-1P50220 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Btrc-209ENSMUST00000224478 2194 ntBASIC9.72□□□□□ -0.85
Nkx2-1P50220 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Gm26660-202ENSMUST00000223620 4112 ntBASIC9.72□□□□□ -0.85
Nkx2-1P50220 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 AC154314.2-201ENSMUST00000223677 3502 ntBASIC9.72□□□□□ -0.85
Nkx2-1P50220 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Nkx2-1P50220 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nkx2-1P50220 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Nkx2-1P50220 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nkx2-1P50220 Gm44755-201ENSMUST00000207830 2102 ntBASIC9.71□□□□□ -0.85
Nkx2-1P50220 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Nkx2-1P50220 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Nkx2-1P50220 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nkx2-1P50220 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Nkx2-1P50220 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nkx2-1P50220 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nkx2-1P50220 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nkx2-1P50220 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nkx2-1P50220 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nkx2-1P50220 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Nkx2-1P50220 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Nkx2-1P50220 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nkx2-1P50220 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nkx2-1P50220 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Nkx2-1P50220 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nkx2-1P50220 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nkx2-1P50220 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nkx2-1P50220 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms