Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox2P48432 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox2P48432 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox2P48432 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox2P48432 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.98□□□□□ -0.65
Sox2P48432 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox2P48432 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox2P48432 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox2P48432 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox2P48432 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox2P48432 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox2P48432 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox2P48432 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Sox2P48432 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.98□□□□□ -0.65
Sox2P48432 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.98□□□□□ -0.65
Sox2P48432 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox2P48432 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox2P48432 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox2P48432 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.98□□□□□ -0.65
Sox2P48432 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Sox2P48432 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC10.98□□□□□ -0.65
Sox2P48432 Lect2-202ENSMUST00000225183 823 ntBASIC10.98□□□□□ -0.65
Sox2P48432 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox2P48432 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox2P48432 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox2P48432 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox2P48432 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Sox2P48432 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox2P48432 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.98□□□□□ -0.65
Sox2P48432 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox2P48432 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.98□□□□□ -0.65
Sox2P48432 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox2P48432 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox2P48432 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Sox2P48432 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox2P48432 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox2P48432 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Sox2P48432 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox2P48432 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.98□□□□□ -0.65
Sox2P48432 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox2P48432 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Sox2P48432 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox2P48432 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox2P48432 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox2P48432 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox2P48432 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.97□□□□□ -0.65
Sox2P48432 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox2P48432 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.97□□□□□ -0.65
Sox2P48432 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox2P48432 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox2P48432 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox2P48432 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox2P48432 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox2P48432 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Sox2P48432 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.97□□□□□ -0.65
Sox2P48432 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox2P48432 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Sox2P48432 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox2P48432 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Sox2P48432 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Sox2P48432 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sox2P48432 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox2P48432 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sox2P48432 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox2P48432 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sox2P48432 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox2P48432 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Sox2P48432 Gm6114-201ENSMUST00000182472 968 ntBASIC10.97□□□□□ -0.65
Sox2P48432 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.97□□□□□ -0.65
Sox2P48432 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.97□□□□□ -0.65
Sox2P48432 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.97□□□□□ -0.65
Sox2P48432 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sox2P48432 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox2P48432 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sox2P48432 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox2P48432 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sox2P48432 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.97□□□□□ -0.65
Sox2P48432 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sox2P48432 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox2P48432 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sox2P48432 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Sox2P48432 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox2P48432 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.97□□□□□ -0.65
Sox2P48432 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.97□□□□□ -0.65
Sox2P48432 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sox2P48432 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox2P48432 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox2P48432 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.97□□□□□ -0.65
Sox2P48432 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sox2P48432 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox2P48432 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sox2P48432 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox2P48432 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Sox2P48432 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox2P48432 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox2P48432 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.65
Sox2P48432 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox2P48432 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox2P48432 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.65
Sox2P48432 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms