Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rfx1P48377 Gm43438-201ENSMUST00000198133 379 ntBASIC14.01□□□□□ -0.17
Rfx1P48377 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx1P48377 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Rfx1P48377 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx1P48377 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx1P48377 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Rfx1P48377 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC14.01□□□□□ -0.17
Rfx1P48377 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx1P48377 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx1P48377 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rfx1P48377 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx1P48377 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx1P48377 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx1P48377 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx1P48377 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC14.01□□□□□ -0.17
Rfx1P48377 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx1P48377 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx1P48377 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx1P48377 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Rfx1P48377 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Rfx1P48377 Gm4864-201ENSMUST00000219894 1461 ntBASIC14□□□□□ -0.17
Rfx1P48377 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx1P48377 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rfx1P48377 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx1P48377 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx1P48377 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rfx1P48377 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx1P48377 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14□□□□□ -0.17
Rfx1P48377 BC043934-202ENSMUST00000185694 2356 ntBASIC14□□□□□ -0.17
Rfx1P48377 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC14□□□□□ -0.17
Rfx1P48377 Gm22018-201ENSMUST00000104357 131 ntBASIC14□□□□□ -0.17
Rfx1P48377 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rfx1P48377 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Rfx1P48377 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx1P48377 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14□□□□□ -0.17
Rfx1P48377 Gm6023-201ENSMUST00000118217 606 ntBASIC14□□□□□ -0.17
Rfx1P48377 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rfx1P48377 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rfx1P48377 Gm5745-201ENSMUST00000183748 313 ntBASIC14□□□□□ -0.17
Rfx1P48377 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC14□□□□□ -0.17
Rfx1P48377 Gm8176-201ENSMUST00000191297 1099 ntBASIC14□□□□□ -0.17
Rfx1P48377 Gm5850-201ENSMUST00000192923 1206 ntBASIC14□□□□□ -0.17
Rfx1P48377 Gm38158-201ENSMUST00000194617 339 ntBASIC14□□□□□ -0.17
Rfx1P48377 Gm37008-201ENSMUST00000195712 319 ntBASIC14□□□□□ -0.17
Rfx1P48377 Gm9004-201ENSMUST00000218739 1222 ntBASIC14□□□□□ -0.17
Rfx1P48377 AC163667.3-201ENSMUST00000225774 222 ntBASIC14□□□□□ -0.17
Rfx1P48377 AC154462.2-201ENSMUST00000227519 370 ntBASIC14□□□□□ -0.17
Rfx1P48377 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rfx1P48377 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx1P48377 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
Rfx1P48377 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rfx1P48377 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx1P48377 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx1P48377 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx1P48377 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx1P48377 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx1P48377 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC14□□□□□ -0.17
Rfx1P48377 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rfx1P48377 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx1P48377 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Rfx1P48377 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx1P48377 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx1P48377 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx1P48377 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx1P48377 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx1P48377 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx1P48377 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.99□□□□□ -0.17
Rfx1P48377 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx1P48377 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx1P48377 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Rfx1P48377 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx1P48377 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx1P48377 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx1P48377 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Rfx1P48377 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Rfx1P48377 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx1P48377 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx1P48377 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Rfx1P48377 Gm8602-201ENSMUST00000184045 607 ntBASIC13.99□□□□□ -0.17
Rfx1P48377 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.99□□□□□ -0.17
Rfx1P48377 Gm38241-201ENSMUST00000192641 898 ntBASIC13.99□□□□□ -0.17
Rfx1P48377 Gm43275-201ENSMUST00000202053 1020 ntBASIC13.99□□□□□ -0.17
Rfx1P48377 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.99□□□□□ -0.17
Rfx1P48377 Gm5950-201ENSMUST00000213337 772 ntBASIC13.99□□□□□ -0.17
Rfx1P48377 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.99□□□□□ -0.17
Rfx1P48377 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx1P48377 AC132446.1-201ENSMUST00000222655 226 ntBASIC13.99□□□□□ -0.17
Rfx1P48377 Lect2-202ENSMUST00000225183 823 ntBASIC13.99□□□□□ -0.17
Rfx1P48377 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.99□□□□□ -0.17
Rfx1P48377 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx1P48377 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx1P48377 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx1P48377 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx1P48377 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx1P48377 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx1P48377 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.99□□□□□ -0.17
Rfx1P48377 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Rfx1P48377 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx1P48377 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms