Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Gm7488-201ENSMUST00000117148 684 ntBASIC9.28□□□□□ -0.92
Rom1P32958 Gm12058-201ENSMUST00000118614 437 ntBASIC9.28□□□□□ -0.92
Rom1P32958 Gm15920-201ENSMUST00000118998 402 ntBASIC9.28□□□□□ -0.92
Rom1P32958 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Gm11960-201ENSMUST00000122068 925 ntBASIC9.28□□□□□ -0.92
Rom1P32958 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC9.28□□□□□ -0.92
Rom1P32958 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
Rom1P32958 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Gm24644-201ENSMUST00000157114 139 ntBASIC9.28□□□□□ -0.92
Rom1P32958 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC9.28□□□□□ -0.92
Rom1P32958 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC9.28□□□□□ -0.92
Rom1P32958 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Rom1P32958 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 AC123738.2-201ENSMUST00000223791 1899 ntBASIC9.28□□□□□ -0.92
Rom1P32958 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Rom1P32958 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
Rom1P32958 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
Rom1P32958 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.27□□□□□ -0.92
Rom1P32958 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Rom1P32958 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Rom1P32958 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Rom1P32958 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC9.27□□□□□ -0.92
Rom1P32958 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Rom1P32958 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
Rom1P32958 Gm14150-201ENSMUST00000122404 1354 ntBASIC9.27□□□□□ -0.93
Rom1P32958 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Rom1P32958 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rom1P32958 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rom1P32958 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rom1P32958 Gm38140-201ENSMUST00000193617 2755 ntBASIC9.27□□□□□ -0.93
Rom1P32958 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Rom1P32958 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC9.27□□□□□ -0.93
Rom1P32958 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Rom1P32958 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rom1P32958 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC9.27□□□□□ -0.93
Rom1P32958 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rom1P32958 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rom1P32958 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC9.27□□□□□ -0.93
Rom1P32958 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Rom1P32958 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rom1P32958 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC9.27□□□□□ -0.93
Rom1P32958 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC9.27□□□□□ -0.93
Rom1P32958 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Rom1P32958 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Rom1P32958 Gm8801-201ENSMUST00000173255 1064 ntBASIC9.27□□□□□ -0.93
Rom1P32958 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rom1P32958 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Rom1P32958 AL593843.1-201ENSMUST00000195891 145 ntBASIC9.27□□□□□ -0.93
Rom1P32958 Gm43966-201ENSMUST00000203301 612 ntBASIC9.27□□□□□ -0.93
Rom1P32958 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC9.27□□□□□ -0.93
Rom1P32958 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC9.27□□□□□ -0.93
Rom1P32958 AC162801.1-201ENSMUST00000220612 198 ntBASIC9.27□□□□□ -0.93
Rom1P32958 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rom1P32958 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rom1P32958 Gm5356-201ENSMUST00000093326 615 ntBASIC9.27□□□□□ -0.93
Rom1P32958 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Rom1P32958 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC9.27□□□□□ -0.93
Rom1P32958 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rom1P32958 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Rom1P32958 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rom1P32958 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Rom1P32958 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC9.27□□□□□ -0.93
Rom1P32958 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Rom1P32958 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Rom1P32958 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Rom1P32958 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rom1P32958 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rom1P32958 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms