Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Col8a2P25318 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Col8a2P25318 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Col8a2P25318 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Col8a2P25318 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Col8a2P25318 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC9.8□□□□□ -0.84
Col8a2P25318 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC9.8□□□□□ -0.84
Col8a2P25318 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Col8a2P25318 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Col8a2P25318 Gm8146-201ENSMUST00000192106 1847 ntBASIC9.8□□□□□ -0.84
Col8a2P25318 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Col8a2P25318 Gm13347-201ENSMUST00000120298 1353 ntBASIC9.8□□□□□ -0.84
Col8a2P25318 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Col8a2P25318 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC9.8□□□□□ -0.84
Col8a2P25318 Gm12036-201ENSMUST00000120008 530 ntBASIC9.8□□□□□ -0.84
Col8a2P25318 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC9.8□□□□□ -0.84
Col8a2P25318 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC9.8□□□□□ -0.84
Col8a2P25318 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC9.8□□□□□ -0.84
Col8a2P25318 Gm8459-201ENSMUST00000162504 760 ntBASIC9.8□□□□□ -0.84
Col8a2P25318 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Col8a2P25318 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Col8a2P25318 Gm38151-201ENSMUST00000195085 289 ntBASIC9.8□□□□□ -0.84
Col8a2P25318 Gm6450-201ENSMUST00000200896 574 ntBASIC9.8□□□□□ -0.84
Col8a2P25318 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Col8a2P25318 Gm8285-201ENSMUST00000208293 759 ntBASIC9.8□□□□□ -0.84
Col8a2P25318 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC9.8□□□□□ -0.84
Col8a2P25318 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Col8a2P25318 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Col8a2P25318 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Col8a2P25318 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Col8a2P25318 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
Col8a2P25318 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Col8a2P25318 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Col8a2P25318 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Col8a2P25318 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Col8a2P25318 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC9.8□□□□□ -0.84
Col8a2P25318 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC9.79□□□□□ -0.84
Col8a2P25318 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Gm13722-201ENSMUST00000117964 3066 ntBASIC9.79□□□□□ -0.84
Col8a2P25318 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC9.79□□□□□ -0.84
Col8a2P25318 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Gm38194-201ENSMUST00000194529 2211 ntBASIC9.79□□□□□ -0.84
Col8a2P25318 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Gm6903-201ENSMUST00000160509 1366 ntBASIC9.79□□□□□ -0.84
Col8a2P25318 Gm43172-201ENSMUST00000202139 2137 ntBASIC9.79□□□□□ -0.84
Col8a2P25318 AC091458.1-201ENSMUST00000220902 1361 ntBASIC9.79□□□□□ -0.84
Col8a2P25318 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC9.79□□□□□ -0.84
Col8a2P25318 Gm11836-201ENSMUST00000121022 441 ntBASIC9.79□□□□□ -0.84
Col8a2P25318 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC9.79□□□□□ -0.84
Col8a2P25318 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC9.79□□□□□ -0.84
Col8a2P25318 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC9.79□□□□□ -0.84
Col8a2P25318 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
Col8a2P25318 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC9.79□□□□□ -0.84
Col8a2P25318 Ighv1-48-201ENSMUST00000191795 294 ntBASIC9.79□□□□□ -0.84
Col8a2P25318 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC9.79□□□□□ -0.84
Col8a2P25318 Gm18393-201ENSMUST00000208349 1131 ntBASIC9.79□□□□□ -0.84
Col8a2P25318 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC9.79□□□□□ -0.84
Col8a2P25318 CT009713.8-202ENSMUST00000224732 385 ntBASIC9.79□□□□□ -0.84
Col8a2P25318 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC9.79□□□□□ -0.84
Col8a2P25318 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC9.79□□□□□ -0.84
Col8a2P25318 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
Col8a2P25318 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Gm37600-201ENSMUST00000193764 3292 ntBASIC9.79□□□□□ -0.84
Col8a2P25318 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Col8a2P25318 Gm44573-201ENSMUST00000191753 2370 ntBASIC9.79□□□□□ -0.84
Col8a2P25318 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC9.79□□□□□ -0.84
Col8a2P25318 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a2P25318 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
Col8a2P25318 AC158355.1-201ENSMUST00000215895 1705 ntBASIC9.79□□□□□ -0.84
Col8a2P25318 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms