Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Gm8752-201ENSMUST00000173427 1694 ntBASIC9.58□□□□□ -0.88
Sdc1P18828 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Sdc1P18828 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC9.58□□□□□ -0.88
Sdc1P18828 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC9.58□□□□□ -0.88
Sdc1P18828 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Sdc1P18828 Gm13492-201ENSMUST00000119772 665 ntBASIC9.58□□□□□ -0.88
Sdc1P18828 Gm14441-201ENSMUST00000121960 540 ntBASIC9.58□□□□□ -0.88
Sdc1P18828 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC9.58□□□□□ -0.88
Sdc1P18828 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC9.58□□□□□ -0.88
Sdc1P18828 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Gm22175-201ENSMUST00000175007 78 ntBASIC9.58□□□□□ -0.88
Sdc1P18828 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC9.58□□□□□ -0.88
Sdc1P18828 Uba52-ps-201ENSMUST00000183770 379 ntBASIC9.58□□□□□ -0.88
Sdc1P18828 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC9.58□□□□□ -0.88
Sdc1P18828 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Gm31326-201ENSMUST00000191856 1048 ntBASIC9.58□□□□□ -0.88
Sdc1P18828 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC9.58□□□□□ -0.88
Sdc1P18828 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC9.58□□□□□ -0.88
Sdc1P18828 Gm32025-201ENSMUST00000217960 307 ntBASIC9.58□□□□□ -0.88
Sdc1P18828 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC9.58□□□□□ -0.88
Sdc1P18828 AC108416.1-202ENSMUST00000228927 1201 ntBASIC9.58□□□□□ -0.88
Sdc1P18828 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
Sdc1P18828 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC9.58□□□□□ -0.88
Sdc1P18828 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Sdc1P18828 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
Sdc1P18828 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sdc1P18828 Gm8320-201ENSMUST00000177584 1762 ntBASIC9.58□□□□□ -0.88
Sdc1P18828 Gm8303-201ENSMUST00000178371 1762 ntBASIC9.58□□□□□ -0.88
Sdc1P18828 Gm8331-201ENSMUST00000178433 1762 ntBASIC9.58□□□□□ -0.88
Sdc1P18828 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sdc1P18828 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sdc1P18828 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Sdc1P18828 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Sdc1P18828 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sdc1P18828 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Sdc1P18828 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sdc1P18828 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC9.57□□□□□ -0.88
Sdc1P18828 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sdc1P18828 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Sdc1P18828 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sdc1P18828 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Sdc1P18828 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC9.57□□□□□ -0.88
Sdc1P18828 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Sdc1P18828 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sdc1P18828 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sdc1P18828 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sdc1P18828 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC9.57□□□□□ -0.88
Sdc1P18828 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sdc1P18828 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sdc1P18828 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Sdc1P18828 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sdc1P18828 Gm12314-201ENSMUST00000118104 538 ntBASIC9.57□□□□□ -0.88
Sdc1P18828 Gm13223-201ENSMUST00000118609 747 ntBASIC9.57□□□□□ -0.88
Sdc1P18828 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Sdc1P18828 Gm2231-201ENSMUST00000125661 612 ntBASIC9.57□□□□□ -0.88
Sdc1P18828 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
Sdc1P18828 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC9.57□□□□□ -0.88
Sdc1P18828 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sdc1P18828 Gm15429-201ENSMUST00000151268 798 ntBASIC9.57□□□□□ -0.88
Sdc1P18828 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC9.57□□□□□ -0.88
Sdc1P18828 Gm8018-201ENSMUST00000173536 789 ntBASIC9.57□□□□□ -0.88
Sdc1P18828 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC9.57□□□□□ -0.88
Sdc1P18828 Gm5276-201ENSMUST00000196683 1047 ntBASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms