Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CCL2P13500 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.02□□□□□ -0.33
CCL2P13500 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
CCL2P13500 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL2P13500 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL2P13500 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
CCL2P13500 FKBP4P6-201ENST00000457486 1332 ntBASIC13.02□□□□□ -0.33
CCL2P13500 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.02□□□□□ -0.33
CCL2P13500 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL2P13500 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL2P13500 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCL2P13500 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.02□□□□□ -0.33
CCL2P13500 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL2P13500 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.02□□□□□ -0.33
CCL2P13500 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL2P13500 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL2P13500 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL2P13500 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL2P13500 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.02□□□□□ -0.33
CCL2P13500 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCL2P13500 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCL2P13500 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.02□□□□□ -0.33
CCL2P13500 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCL2P13500 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCL2P13500 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL2P13500 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL2P13500 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL2P13500 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL2P13500 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.01□□□□□ -0.33
CCL2P13500 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL2P13500 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
CCL2P13500 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL2P13500 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL2P13500 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCL2P13500 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCL2P13500 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL2P13500 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.01□□□□□ -0.33
CCL2P13500 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CCL2P13500 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCL2P13500 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL2P13500 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
CCL2P13500 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCL2P13500 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL2P13500 MIR1202-201ENST00000408529 83 ntBASIC13.01□□□□□ -0.33
CCL2P13500 CNN2P8-201ENST00000421872 913 ntBASIC13.01□□□□□ -0.33
CCL2P13500 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.01□□□□□ -0.33
CCL2P13500 AC007969.1-201ENST00000433675 447 ntBASIC13.01□□□□□ -0.33
CCL2P13500 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CCL2P13500 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.01□□□□□ -0.33
CCL2P13500 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CCL2P13500 RPL7P3-201ENST00000441388 714 ntBASIC13.01□□□□□ -0.33
CCL2P13500 AL391280.1-201ENST00000506969 1062 ntBASIC13.01□□□□□ -0.33
CCL2P13500 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.01□□□□□ -0.33
CCL2P13500 AC104989.1-201ENST00000519711 778 ntBASIC13.01□□□□□ -0.33
CCL2P13500 IGHV3-71-201ENST00000523324 359 ntBASIC13.01□□□□□ -0.33
CCL2P13500 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.01□□□□□ -0.33
CCL2P13500 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.01□□□□□ -0.33
CCL2P13500 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCL2P13500 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.01□□□□□ -0.33
CCL2P13500 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.01□□□□□ -0.33
CCL2P13500 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.01□□□□□ -0.33
CCL2P13500 OR10B1P-201ENST00000601666 907 ntBASIC13.01□□□□□ -0.33
CCL2P13500 AC138466.3-201ENST00000619983 221 ntBASIC13.01□□□□□ -0.33
CCL2P13500 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCL2P13500 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCL2P13500 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.01□□□□□ -0.33
CCL2P13500 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL2P13500 AC011840.2-201ENST00000563063 1520 ntBASIC13.01□□□□□ -0.33
CCL2P13500 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCL2P13500 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCL2P13500 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL2P13500 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.01□□□□□ -0.33
CCL2P13500 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL2P13500 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL2P13500 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.01□□□□□ -0.33
CCL2P13500 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCL2P13500 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CCL2P13500 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CCL2P13500 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.01□□□□□ -0.33
CCL2P13500 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCL2P13500 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13□□□□□ -0.33
CCL2P13500 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCL2P13500 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCL2P13500 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13□□□□□ -0.33
CCL2P13500 AC097359.2-201ENST00000604992 2389 ntBASIC13□□□□□ -0.33
CCL2P13500 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CCL2P13500 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CCL2P13500 FES-203ENST00000394302 2133 ntTSL 5 BASIC13□□□□□ -0.33
CCL2P13500 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13□□□□□ -0.33
CCL2P13500 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCL2P13500 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13□□□□□ -0.33
CCL2P13500 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13□□□□□ -0.33
CCL2P13500 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCL2P13500 AC003102.2-201ENST00000589195 1469 ntBASIC13□□□□□ -0.33
CCL2P13500 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCL2P13500 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CCL2P13500 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CCL2P13500 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13□□□□□ -0.33
CCL2P13500 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCL2P13500 OR8S1-201ENST00000310194 1080 ntBASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms