Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.78□□□□□ -0.68
P01852 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC10.78□□□□□ -0.68
P01852 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.78□□□□□ -0.68
P01852 Gm2553-201ENSMUST00000215986 605 ntBASIC10.78□□□□□ -0.68
P01852 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.78□□□□□ -0.68
P01852 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.78□□□□□ -0.68
P01852 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
P01852 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
P01852 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.78□□□□□ -0.68
P01852 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.78□□□□□ -0.68
P01852 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
P01852 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.78□□□□□ -0.68
P01852 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
P01852 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
P01852 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
P01852 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.68
P01852 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
P01852 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
P01852 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
P01852 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
P01852 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
P01852 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.77□□□□□ -0.68
P01852 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01852 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01852 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
P01852 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P01852 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01852 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01852 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01852 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
P01852 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01852 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01852 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01852 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.69
P01852 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
P01852 Gm11509-201ENSMUST00000117358 325 ntBASIC10.77□□□□□ -0.69
P01852 Gm12501-201ENSMUST00000119163 529 ntBASIC10.77□□□□□ -0.69
P01852 Gm15004-201ENSMUST00000119192 630 ntBASIC10.77□□□□□ -0.69
P01852 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.77□□□□□ -0.69
P01852 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01852 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
P01852 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P01852 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01852 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01852 Gm21811-201ENSMUST00000096485 930 ntBASIC10.77□□□□□ -0.69
P01852 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01852 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01852 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P01852 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
P01852 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.77□□□□□ -0.69
P01852 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P01852 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P01852 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P01852 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
P01852 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01852 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01852 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01852 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.77□□□□□ -0.69
P01852 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P01852 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01852 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01852 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
P01852 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
P01852 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
P01852 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
P01852 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms