Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.09□□□□□ -0.47
CopeO89079 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.09□□□□□ -0.47
CopeO89079 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CopeO89079 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopeO89079 Gm11531-201ENSMUST00000117614 555 ntBASIC12.09□□□□□ -0.47
CopeO89079 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.09□□□□□ -0.47
CopeO89079 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CopeO89079 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CopeO89079 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.09□□□□□ -0.47
CopeO89079 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopeO89079 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopeO89079 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.09□□□□□ -0.47
CopeO89079 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.09□□□□□ -0.47
CopeO89079 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.09□□□□□ -0.47
CopeO89079 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.09□□□□□ -0.47
CopeO89079 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.09□□□□□ -0.47
CopeO89079 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopeO89079 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
CopeO89079 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopeO89079 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.09□□□□□ -0.47
CopeO89079 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopeO89079 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CopeO89079 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopeO89079 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CopeO89079 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopeO89079 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopeO89079 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopeO89079 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CopeO89079 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.09□□□□□ -0.47
CopeO89079 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopeO89079 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.09□□□□□ -0.47
CopeO89079 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopeO89079 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
CopeO89079 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopeO89079 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopeO89079 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CopeO89079 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopeO89079 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CopeO89079 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.08□□□□□ -0.48
CopeO89079 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopeO89079 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopeO89079 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CopeO89079 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopeO89079 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CopeO89079 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.08□□□□□ -0.48
CopeO89079 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
CopeO89079 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopeO89079 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CopeO89079 Gm11989-201ENSMUST00000117240 672 ntBASIC12.08□□□□□ -0.48
CopeO89079 Gm11362-201ENSMUST00000118838 850 ntBASIC12.08□□□□□ -0.48
CopeO89079 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.08□□□□□ -0.48
CopeO89079 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.08□□□□□ -0.48
CopeO89079 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.08□□□□□ -0.48
CopeO89079 Gm5370-201ENSMUST00000187187 574 ntBASIC12.08□□□□□ -0.48
CopeO89079 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CopeO89079 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.08□□□□□ -0.48
CopeO89079 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.08□□□□□ -0.48
CopeO89079 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopeO89079 Lect2-202ENSMUST00000225183 823 ntBASIC12.08□□□□□ -0.48
CopeO89079 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.08□□□□□ -0.48
CopeO89079 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopeO89079 Gm10254-201ENSMUST00000052888 867 ntBASIC12.08□□□□□ -0.48
CopeO89079 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopeO89079 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopeO89079 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
CopeO89079 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopeO89079 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopeO89079 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopeO89079 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.08□□□□□ -0.48
CopeO89079 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.08□□□□□ -0.48
CopeO89079 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopeO89079 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CopeO89079 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CopeO89079 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopeO89079 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.08□□□□□ -0.48
CopeO89079 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.08□□□□□ -0.48
CopeO89079 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopeO89079 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopeO89079 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopeO89079 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.08□□□□□ -0.48
CopeO89079 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
CopeO89079 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopeO89079 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopeO89079 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.07□□□□□ -0.48
CopeO89079 Gm22018-201ENSMUST00000104357 131 ntBASIC12.07□□□□□ -0.48
CopeO89079 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CopeO89079 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CopeO89079 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms