Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc180J3QNE4 Gm45743-201ENSMUST00000212701 2795 ntBASIC21.12■□□□□ 0.97
Ccdc180J3QNE4 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc180J3QNE4 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc180J3QNE4 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc180J3QNE4 Gm3828-201ENSMUST00000121817 257 ntBASIC21.12■□□□□ 0.97
Ccdc180J3QNE4 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc180J3QNE4 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc180J3QNE4 Mir6923-201ENSMUST00000184592 72 ntBASIC21.12■□□□□ 0.97
Ccdc180J3QNE4 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC21.12■□□□□ 0.97
Ccdc180J3QNE4 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc180J3QNE4 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Ccdc180J3QNE4 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc180J3QNE4 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc180J3QNE4 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Ccdc180J3QNE4 Gm37600-201ENSMUST00000193764 3292 ntBASIC21.11■□□□□ 0.97
Ccdc180J3QNE4 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc180J3QNE4 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC21.11■□□□□ 0.97
Ccdc180J3QNE4 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc180J3QNE4 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Ccdc180J3QNE4 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc180J3QNE4 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc180J3QNE4 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc180J3QNE4 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Ccdc180J3QNE4 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Ccdc180J3QNE4 Gm12453-201ENSMUST00000121981 331 ntBASIC21.11■□□□□ 0.97
Ccdc180J3QNE4 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Ccdc180J3QNE4 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Ccdc180J3QNE4 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Ccdc180J3QNE4 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc180J3QNE4 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc180J3QNE4 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc180J3QNE4 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc180J3QNE4 AC108858.2-201ENSMUST00000228186 1425 ntBASIC21.11■□□□□ 0.97
Ccdc180J3QNE4 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Ccdc180J3QNE4 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc180J3QNE4 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc180J3QNE4 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc180J3QNE4 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Ccdc180J3QNE4 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc180J3QNE4 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc180J3QNE4 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Ccdc180J3QNE4 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Ccdc180J3QNE4 Gm29164-201ENSMUST00000185454 1024 ntBASIC21.1■□□□□ 0.97
Ccdc180J3QNE4 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc180J3QNE4 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc180J3QNE4 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC21.1■□□□□ 0.97
Ccdc180J3QNE4 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc180J3QNE4 Gm45428-201ENSMUST00000209619 1789 ntBASIC21.1■□□□□ 0.97
Ccdc180J3QNE4 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc180J3QNE4 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Ccdc180J3QNE4 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc180J3QNE4 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Ccdc180J3QNE4 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC21.1■□□□□ 0.97
Ccdc180J3QNE4 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc180J3QNE4 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Ccdc180J3QNE4 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC21.1■□□□□ 0.97
Ccdc180J3QNE4 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc180J3QNE4 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc180J3QNE4 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Ccdc180J3QNE4 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc180J3QNE4 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Ccdc180J3QNE4 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC21.1■□□□□ 0.97
Ccdc180J3QNE4 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC21.1■□□□□ 0.97
Ccdc180J3QNE4 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Gm5555-201ENSMUST00000120352 1111 ntBASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Gm15196-201ENSMUST00000121406 482 ntBASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Id2-203ENSMUST00000222667 958 ntBASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 CT030170.2-201ENSMUST00000223267 126 ntBASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 AC164107.1-201ENSMUST00000227730 2161 ntBASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Gm11700-201ENSMUST00000119409 403 ntBASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Gm14234-201ENSMUST00000119539 845 ntBASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms