Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC11.07□□□□□ -0.64
Colca2F8VPY8 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Colca2F8VPY8 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.07□□□□□ -0.64
Colca2F8VPY8 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC11.07□□□□□ -0.64
Colca2F8VPY8 Gm27956-201ENSMUST00000175604 260 ntBASIC11.07□□□□□ -0.64
Colca2F8VPY8 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC11.07□□□□□ -0.64
Colca2F8VPY8 Gm24954-201ENSMUST00000178831 110 ntBASIC11.07□□□□□ -0.64
Colca2F8VPY8 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Colca2F8VPY8 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Colca2F8VPY8 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Colca2F8VPY8 Gm43249-201ENSMUST00000200464 458 ntBASIC11.07□□□□□ -0.64
Colca2F8VPY8 Gm44124-201ENSMUST00000204159 472 ntBASIC11.07□□□□□ -0.64
Colca2F8VPY8 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Colca2F8VPY8 Gm9102-201ENSMUST00000219250 465 ntBASIC11.07□□□□□ -0.64
Colca2F8VPY8 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Colca2F8VPY8 Id2-203ENSMUST00000222667 958 ntBASIC11.07□□□□□ -0.64
Colca2F8VPY8 AC102847.1-202ENSMUST00000226313 1245 ntBASIC11.07□□□□□ -0.64
Colca2F8VPY8 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.07□□□□□ -0.64
Colca2F8VPY8 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Colca2F8VPY8 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Colca2F8VPY8 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Colca2F8VPY8 Gm9791-201ENSMUST00000060997 447 ntBASIC11.07□□□□□ -0.64
Colca2F8VPY8 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Colca2F8VPY8 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Colca2F8VPY8 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Colca2F8VPY8 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Colca2F8VPY8 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Colca2F8VPY8 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Colca2F8VPY8 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Colca2F8VPY8 Gm14005-210ENSMUST00000225087 1413 ntBASIC11.07□□□□□ -0.64
Colca2F8VPY8 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Colca2F8VPY8 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Colca2F8VPY8 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Colca2F8VPY8 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.07□□□□□ -0.64
Colca2F8VPY8 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.07□□□□□ -0.64
Colca2F8VPY8 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Colca2F8VPY8 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Colca2F8VPY8 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Colca2F8VPY8 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Colca2F8VPY8 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Colca2F8VPY8 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Colca2F8VPY8 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Colca2F8VPY8 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.06□□□□□ -0.64
Colca2F8VPY8 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.06□□□□□ -0.64
Colca2F8VPY8 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Gm25148-201ENSMUST00000104611 123 ntBASIC11.06□□□□□ -0.64
Colca2F8VPY8 Gm14052-201ENSMUST00000121434 1031 ntBASIC11.06□□□□□ -0.64
Colca2F8VPY8 Gm11993-201ENSMUST00000121861 820 ntBASIC11.06□□□□□ -0.64
Colca2F8VPY8 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Mir432-201ENSMUST00000157230 75 ntBASIC11.06□□□□□ -0.64
Colca2F8VPY8 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Colca2F8VPY8 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Colca2F8VPY8 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Colca2F8VPY8 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Colca2F8VPY8 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Colca2F8VPY8 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.06□□□□□ -0.64
Colca2F8VPY8 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Gm44814-201ENSMUST00000207018 434 ntBASIC11.06□□□□□ -0.64
Colca2F8VPY8 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Colca2F8VPY8 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Colca2F8VPY8 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Colca2F8VPY8 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Colca2F8VPY8 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Colca2F8VPY8 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Colca2F8VPY8 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Colca2F8VPY8 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms