Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Mir1247-201ENSMUST00000116706 82 ntBASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Gm37102-201ENSMUST00000195740 1105 ntBASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Gm32390-201ENSMUST00000212713 1172 ntBASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Gm2594-201ENSMUST00000214774 742 ntBASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.58□□□□□ -0.71
Pcdh1F7BJK1 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.71
Pcdh1F7BJK1 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Gm14127-201ENSMUST00000117906 678 ntBASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Gm38116-201ENSMUST00000193873 1533 ntBASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
Pcdh1F7BJK1 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pcdh1F7BJK1 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms