Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
Sptbn4E9PX29 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.51□□□□□ -0.73
Sptbn4E9PX29 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sptbn4E9PX29 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.51□□□□□ -0.73
Sptbn4E9PX29 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sptbn4E9PX29 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sptbn4E9PX29 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Sptbn4E9PX29 Gm22495-201ENSMUST00000104492 126 ntBASIC10.51□□□□□ -0.73
Sptbn4E9PX29 Gm21778-201ENSMUST00000178779 471 ntBASIC10.51□□□□□ -0.73
Sptbn4E9PX29 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.51□□□□□ -0.73
Sptbn4E9PX29 Gm45090-201ENSMUST00000208775 1148 ntBASIC10.51□□□□□ -0.73
Sptbn4E9PX29 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.51□□□□□ -0.73
Sptbn4E9PX29 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sptbn4E9PX29 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Sptbn4E9PX29 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Sptbn4E9PX29 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sptbn4E9PX29 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC10.51□□□□□ -0.73
Sptbn4E9PX29 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Gm23129-201ENSMUST00000104259 132 ntBASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Mir6387-201ENSMUST00000184042 108 ntBASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 AC154433.1-201ENSMUST00000224401 1183 ntBASIC10.5□□□□□ -0.73
Sptbn4E9PX29 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Gm5308-201ENSMUST00000196752 1354 ntBASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sptbn4E9PX29 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Sptbn4E9PX29 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sptbn4E9PX29 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sptbn4E9PX29 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Sptbn4E9PX29 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sptbn4E9PX29 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sptbn4E9PX29 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sptbn4E9PX29 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sptbn4E9PX29 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sptbn4E9PX29 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Sptbn4E9PX29 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sptbn4E9PX29 Gm20610-201ENSMUST00000176406 587 ntTSL 5 BASIC10.49□□□□□ -0.73
Sptbn4E9PX29 Gm38145-201ENSMUST00000192319 693 ntBASIC10.49□□□□□ -0.73
Sptbn4E9PX29 Gm44323-201ENSMUST00000198689 129 ntBASIC10.49□□□□□ -0.73
Sptbn4E9PX29 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC10.49□□□□□ -0.73
Sptbn4E9PX29 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sptbn4E9PX29 AC134601.2-201ENSMUST00000221071 130 ntBASIC10.49□□□□□ -0.73
Sptbn4E9PX29 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Sptbn4E9PX29 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC10.49□□□□□ -0.73
Sptbn4E9PX29 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sptbn4E9PX29 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sptbn4E9PX29 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sptbn4E9PX29 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.49□□□□□ -0.73
Sptbn4E9PX29 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 108.1 ms