Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 AC160410.1-201ENSMUST00000219298 1972 ntBASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Gm12012-201ENSMUST00000118857 1066 ntBASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Gm14441-201ENSMUST00000121960 540 ntBASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Gm37542-201ENSMUST00000192563 2832 ntBASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Crry-ps-201ENSMUST00000079090 1309 ntBASIC8.54□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Gm17230-201ENSMUST00000171194 3942 ntBASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Gm13665-201ENSMUST00000120830 528 ntBASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Gm37259-201ENSMUST00000193903 849 ntBASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Gm19287-201ENSMUST00000203190 358 ntBASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Gm7172-201ENSMUST00000218047 1152 ntBASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Gm43773-201ENSMUST00000198548 2162 ntBASIC8.53□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms