Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Gm25201-201ENSMUST00000083093 170 ntBASIC11.29□□□□□ -0.6
SrfQ9JM73 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SrfQ9JM73 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SrfQ9JM73 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SrfQ9JM73 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SrfQ9JM73 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SrfQ9JM73 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SrfQ9JM73 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SrfQ9JM73 Gm42822-201ENSMUST00000200507 1529 ntBASIC11.29□□□□□ -0.6
SrfQ9JM73 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SrfQ9JM73 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SrfQ9JM73 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
SrfQ9JM73 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SrfQ9JM73 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SrfQ9JM73 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SrfQ9JM73 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SrfQ9JM73 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
SrfQ9JM73 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SrfQ9JM73 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
SrfQ9JM73 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
SrfQ9JM73 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
SrfQ9JM73 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.28□□□□□ -0.6
SrfQ9JM73 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
SrfQ9JM73 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
SrfQ9JM73 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
SrfQ9JM73 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.28□□□□□ -0.6
SrfQ9JM73 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.28□□□□□ -0.6
SrfQ9JM73 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.28□□□□□ -0.6
SrfQ9JM73 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.28□□□□□ -0.6
SrfQ9JM73 Gm11244-201ENSMUST00000121243 237 ntBASIC11.28□□□□□ -0.6
SrfQ9JM73 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.28□□□□□ -0.6
SrfQ9JM73 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SrfQ9JM73 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC11.28□□□□□ -0.6
SrfQ9JM73 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Gm3650-201ENSMUST00000180600 747 ntBASIC11.28□□□□□ -0.6
SrfQ9JM73 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC11.28□□□□□ -0.6
SrfQ9JM73 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Gm34701-201ENSMUST00000204213 849 ntBASIC11.28□□□□□ -0.6
SrfQ9JM73 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.28□□□□□ -0.6
SrfQ9JM73 Gm44582-201ENSMUST00000209125 445 ntBASIC11.28□□□□□ -0.6
SrfQ9JM73 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
SrfQ9JM73 Gm9139-201ENSMUST00000218817 700 ntBASIC11.28□□□□□ -0.6
SrfQ9JM73 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.28□□□□□ -0.6
SrfQ9JM73 AC154176.1-201ENSMUST00000225897 220 ntBASIC11.28□□□□□ -0.6
SrfQ9JM73 AC102368.1-201ENSMUST00000227161 892 ntBASIC11.28□□□□□ -0.6
SrfQ9JM73 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
SrfQ9JM73 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.28□□□□□ -0.6
SrfQ9JM73 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
SrfQ9JM73 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.28□□□□□ -0.6
SrfQ9JM73 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SrfQ9JM73 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.28□□□□□ -0.6
SrfQ9JM73 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
SrfQ9JM73 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
SrfQ9JM73 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
SrfQ9JM73 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SrfQ9JM73 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
SrfQ9JM73 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SrfQ9JM73 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SrfQ9JM73 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.27□□□□□ -0.6
SrfQ9JM73 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.27□□□□□ -0.6
SrfQ9JM73 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.27□□□□□ -0.6
SrfQ9JM73 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SrfQ9JM73 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SrfQ9JM73 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.27□□□□□ -0.6
SrfQ9JM73 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms