Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Gm13809-201ENSMUST00000117921 597 ntBASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Gm8731-201ENSMUST00000118088 412 ntBASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Gm26047-201ENSMUST00000157308 113 ntBASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Gm8459-201ENSMUST00000162504 760 ntBASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Mir5120-201ENSMUST00000175020 78 ntBASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Gm37466-201ENSMUST00000195692 652 ntBASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Gm26047-202ENSMUST00000198840 115 ntBASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Upk3aQ9JKX8 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Gm9540-201ENSMUST00000188230 478 ntBASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Gm37246-201ENSMUST00000192665 835 ntBASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Gm6108-201ENSMUST00000208365 367 ntBASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Upk3aQ9JKX8 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms