Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Gm34379-201ENSMUST00000195036 290 ntBASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Gm5996-201ENSMUST00000211110 718 ntBASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Gm9791-201ENSMUST00000060997 447 ntBASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Gm8181-201ENSMUST00000062242 669 ntBASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Mir453-201ENSMUST00000104732 82 ntBASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Gm14034-201ENSMUST00000120147 551 ntBASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx2-4Q9EQM3 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkx2-4Q9EQM3 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms