Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Gm12138-201ENSMUST00000122180 951 ntBASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Gm42693-201ENSMUST00000196779 631 ntBASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Gm8420-201ENSMUST00000097103 598 ntBASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nop56Q9D6Z1 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Gm37201-201ENSMUST00000191845 523 ntBASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Gm43452-201ENSMUST00000201873 991 ntBASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Gm9794-201ENSMUST00000202370 423 ntBASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Gm7561-201ENSMUST00000211203 886 ntBASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Gm18363-201ENSMUST00000221671 730 ntBASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nop56Q9D6Z1 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms