Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Gm42693-201ENSMUST00000196779 631 ntBASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Gm44405-201ENSMUST00000198952 126 ntBASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.84□□□□□ -0.51
Trim42Q9D2H5 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Trim42Q9D2H5 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Trim42Q9D2H5 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim42Q9D2H5 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms