Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Upk1aQ9D132 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Upk1aQ9D132 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Upk1aQ9D132 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.12□□□□□ -0.63
Upk1aQ9D132 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.12□□□□□ -0.63
Upk1aQ9D132 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.12□□□□□ -0.63
Upk1aQ9D132 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.12□□□□□ -0.63
Upk1aQ9D132 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Gm10434-201ENSMUST00000101158 471 ntBASIC11.12□□□□□ -0.63
Upk1aQ9D132 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Gm15824-201ENSMUST00000119516 955 ntBASIC11.12□□□□□ -0.63
Upk1aQ9D132 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.12□□□□□ -0.63
Upk1aQ9D132 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.12□□□□□ -0.63
Upk1aQ9D132 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk1aQ9D132 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.12□□□□□ -0.63
Upk1aQ9D132 Gm5370-201ENSMUST00000187187 574 ntBASIC11.12□□□□□ -0.63
Upk1aQ9D132 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Gm43133-201ENSMUST00000197472 463 ntBASIC11.12□□□□□ -0.63
Upk1aQ9D132 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.12□□□□□ -0.63
Upk1aQ9D132 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk1aQ9D132 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk1aQ9D132 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Upk1aQ9D132 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Upk1aQ9D132 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1aQ9D132 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1aQ9D132 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1aQ9D132 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.11□□□□□ -0.63
Upk1aQ9D132 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Gm5187-201ENSMUST00000117317 991 ntBASIC11.11□□□□□ -0.63
Upk1aQ9D132 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Upk1aQ9D132 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.11□□□□□ -0.63
Upk1aQ9D132 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Gm19309-201ENSMUST00000218295 205 ntBASIC11.11□□□□□ -0.63
Upk1aQ9D132 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.11□□□□□ -0.63
Upk1aQ9D132 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms