Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Hdhd3Q9CYW4 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Hdhd3Q9CYW4 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hdhd3Q9CYW4 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hdhd3Q9CYW4 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hdhd3Q9CYW4 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hdhd3Q9CYW4 AC126257.1-201ENSMUST00000213195 1536 ntBASIC9.55□□□□□ -0.88
Hdhd3Q9CYW4 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hdhd3Q9CYW4 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC9.55□□□□□ -0.88
Hdhd3Q9CYW4 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hdhd3Q9CYW4 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hdhd3Q9CYW4 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC9.55□□□□□ -0.88
Hdhd3Q9CYW4 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC9.55□□□□□ -0.88
Hdhd3Q9CYW4 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hdhd3Q9CYW4 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC9.55□□□□□ -0.88
Hdhd3Q9CYW4 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Hdhd3Q9CYW4 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Hdhd3Q9CYW4 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Hdhd3Q9CYW4 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 AC154314.2-201ENSMUST00000223677 3502 ntBASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Gm18782-201ENSMUST00000209023 1399 ntBASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Gm4984-201ENSMUST00000115987 360 ntBASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Gm13875-201ENSMUST00000120162 282 ntBASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Gm14247-201ENSMUST00000120950 237 ntBASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Gm13570-201ENSMUST00000140763 309 ntBASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Gm5706-201ENSMUST00000181525 993 ntBASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Gm27023-201ENSMUST00000182372 285 ntBASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Gm3890-201ENSMUST00000182416 207 ntBASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Gm37201-201ENSMUST00000191845 523 ntBASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Gm44755-201ENSMUST00000207830 2102 ntBASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 CT025535.1-201ENSMUST00000227172 491 ntBASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Gm38292-201ENSMUST00000192646 3045 ntBASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Btrc-209ENSMUST00000224478 2194 ntBASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Gm36957-201ENSMUST00000192982 2824 ntBASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Hdhd3Q9CYW4 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hdhd3Q9CYW4 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hdhd3Q9CYW4 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Hdhd3Q9CYW4 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC9.53□□□□□ -0.88
Hdhd3Q9CYW4 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hdhd3Q9CYW4 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC9.53□□□□□ -0.88
Hdhd3Q9CYW4 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hdhd3Q9CYW4 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hdhd3Q9CYW4 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hdhd3Q9CYW4 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hdhd3Q9CYW4 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Hdhd3Q9CYW4 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Hdhd3Q9CYW4 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hdhd3Q9CYW4 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hdhd3Q9CYW4 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Hdhd3Q9CYW4 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hdhd3Q9CYW4 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Hdhd3Q9CYW4 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Hdhd3Q9CYW4 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Hdhd3Q9CYW4 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
Hdhd3Q9CYW4 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Hdhd3Q9CYW4 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Hdhd3Q9CYW4 Gm16177-201ENSMUST00000120728 718 ntBASIC9.53□□□□□ -0.88
Hdhd3Q9CYW4 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC9.53□□□□□ -0.88
Hdhd3Q9CYW4 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
Hdhd3Q9CYW4 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
Hdhd3Q9CYW4 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms