Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.27□□□□□ -0.45
Rnf135Q9CWS1 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf135Q9CWS1 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf135Q9CWS1 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.27□□□□□ -0.45
Rnf135Q9CWS1 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Rnf135Q9CWS1 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.45
Rnf135Q9CWS1 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf135Q9CWS1 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf135Q9CWS1 Gm10312-201ENSMUST00000078515 489 ntBASIC12.27□□□□□ -0.45
Rnf135Q9CWS1 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf135Q9CWS1 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf135Q9CWS1 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf135Q9CWS1 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf135Q9CWS1 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf135Q9CWS1 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.27□□□□□ -0.45
Rnf135Q9CWS1 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
Rnf135Q9CWS1 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf135Q9CWS1 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf135Q9CWS1 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf135Q9CWS1 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf135Q9CWS1 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf135Q9CWS1 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf135Q9CWS1 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Rnf135Q9CWS1 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf135Q9CWS1 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Rnf135Q9CWS1 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Rnf135Q9CWS1 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf135Q9CWS1 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rnf135Q9CWS1 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf135Q9CWS1 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rnf135Q9CWS1 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Gm14263-201ENSMUST00000117955 746 ntBASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf135Q9CWS1 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Gm12015-201ENSMUST00000117065 843 ntBASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Gm9230-201ENSMUST00000188228 532 ntBASIC12.25□□□□□ -0.45
Rnf135Q9CWS1 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms