Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ska1Q9CPV1 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Ska1Q9CPV1 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ska1Q9CPV1 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.14□□□□□ -0.63
Ska1Q9CPV1 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.14□□□□□ -0.63
Ska1Q9CPV1 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ska1Q9CPV1 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Gm13316-201ENSMUST00000140537 691 ntBASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Gm2546-201ENSMUST00000182630 991 ntBASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
Ska1Q9CPV1 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms