Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Gm5070-201ENSMUST00000177599 862 ntBASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chmp1b1Q99LU0 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Chmp1b1Q99LU0 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC11.15□□□□□ -0.63
Chmp1b1Q99LU0 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Chmp1b1Q99LU0 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Chmp1b1Q99LU0 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Chmp1b1Q99LU0 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Chmp1b1Q99LU0 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Chmp1b1Q99LU0 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chmp1b1Q99LU0 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms