Protein–RNA interactions for Protein: Q8VD57

Sft2d2, Vesicle transport protein SFT2B, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d2Q8VD57 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
Sft2d2Q8VD57 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Sft2d2Q8VD57 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Sft2d2Q8VD57 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
Sft2d2Q8VD57 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Sft2d2Q8VD57 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Sft2d2Q8VD57 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Sft2d2Q8VD57 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Sft2d2Q8VD57 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Sft2d2Q8VD57 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Sft2d2Q8VD57 AC169511.2-201ENSMUST00000226674 2063 ntBASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Gm14441-201ENSMUST00000121960 540 ntBASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Gm14822-201ENSMUST00000122247 291 ntBASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Gm24513-201ENSMUST00000174964 138 ntBASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Gm27397-201ENSMUST00000184997 107 ntBASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Gm38241-201ENSMUST00000192641 898 ntBASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Gm5781-201ENSMUST00000219792 443 ntBASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 AC159621.2-201ENSMUST00000223519 1326 ntBASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 AC165351.1-201ENSMUST00000219078 2020 ntBASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sft2d2Q8VD57 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 Gm37333-201ENSMUST00000192904 2251 ntBASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 Gm10699-201ENSMUST00000098916 2130 ntBASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 CT009713.5-203ENSMUST00000224218 2079 ntBASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 Gm45828-201ENSMUST00000206938 1836 ntBASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 Gm19178-201ENSMUST00000217524 1819 ntBASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 Gm7789-202ENSMUST00000211273 1400 ntBASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 Spata33-207ENSMUST00000212760 4074 ntBASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC9.43□□□□□ -0.9
Sft2d2Q8VD57 Gm45195-201ENSMUST00000205597 1008 ntBASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms