Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Gm45784-201ENSMUST00000188360 142 ntBASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Gm6439-201ENSMUST00000199849 862 ntBASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Lysmd4Q8CC84 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Gm15824-201ENSMUST00000119516 955 ntBASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Gm2546-201ENSMUST00000182630 991 ntBASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Gm6266-201ENSMUST00000203844 806 ntBASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lysmd4Q8CC84 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Lysmd4Q8CC84 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Lysmd4Q8CC84 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.52□□□□□ -0.72
Lysmd4Q8CC84 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Lysmd4Q8CC84 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Lysmd4Q8CC84 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms