Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Gm15881-201ENSMUST00000148792 942 ntBASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Gm6114-201ENSMUST00000182472 968 ntBASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Gm27390-201ENSMUST00000184516 176 ntBASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Gm7467-201ENSMUST00000185173 652 ntBASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Gm6450-201ENSMUST00000200896 574 ntBASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Gm43377-201ENSMUST00000201640 455 ntBASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Gm9132-201ENSMUST00000210182 832 ntBASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Gm45770-201ENSMUST00000212105 616 ntBASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 AC154634.3-201ENSMUST00000224589 736 ntBASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Gm10179-201ENSMUST00000086233 688 ntBASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Rgr-203ENSMUST00000225070 4704 ntBASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.59□□□□□ -0.55
Pcdh19Q80TF3 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Pcdh19Q80TF3 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Gm7666-201ENSMUST00000146631 819 ntBASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Gm22144-201ENSMUST00000157402 102 ntBASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Gm6108-201ENSMUST00000208365 367 ntBASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms