Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ctdp1Q7TSG2 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Ctdp1Q7TSG2 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Ctdp1Q7TSG2 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Ctdp1Q7TSG2 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ctdp1Q7TSG2 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ctdp1Q7TSG2 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ctdp1Q7TSG2 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ctdp1Q7TSG2 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ctdp1Q7TSG2 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ctdp1Q7TSG2 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ctdp1Q7TSG2 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ctdp1Q7TSG2 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ctdp1Q7TSG2 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ctdp1Q7TSG2 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ctdp1Q7TSG2 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ctdp1Q7TSG2 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Ctdp1Q7TSG2 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ctdp1Q7TSG2 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.83□□□□□ -0.35
Ctdp1Q7TSG2 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ctdp1Q7TSG2 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Gm13316-201ENSMUST00000140537 691 ntBASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Gm7783-201ENSMUST00000204795 781 ntBASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdp1Q7TSG2 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 Gm27023-201ENSMUST00000182372 285 ntBASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 Gm38341-201ENSMUST00000195357 515 ntBASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 Cts7-204ENSMUST00000225321 1257 ntBASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdp1Q7TSG2 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms