Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Gm11660-201ENSMUST00000120955 412 ntBASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 Gm14993-201ENSMUST00000121180 164 ntBASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 Gm23675-201ENSMUST00000157311 125 ntBASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 Gm12407-201ENSMUST00000180219 324 ntBASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 Gm11942-201ENSMUST00000180255 345 ntBASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 Gm19587-201ENSMUST00000191395 545 ntBASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 Gm37981-201ENSMUST00000194280 535 ntBASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 Gm43912-201ENSMUST00000204352 538 ntBASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 Gm6855-201ENSMUST00000206307 790 ntBASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 Gm4930-201ENSMUST00000219926 1087 ntBASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc85bQ6PDY0 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Gm15620-201ENSMUST00000122949 270 ntBASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Gm18561-201ENSMUST00000206027 804 ntBASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 AC121357.1-201ENSMUST00000227365 608 ntBASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc85bQ6PDY0 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc85bQ6PDY0 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc85bQ6PDY0 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc85bQ6PDY0 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc85bQ6PDY0 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc85bQ6PDY0 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc85bQ6PDY0 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.31□□□□□ -0.44
Ccdc85bQ6PDY0 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.31□□□□□ -0.44
Ccdc85bQ6PDY0 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc85bQ6PDY0 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc85bQ6PDY0 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc85bQ6PDY0 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc85bQ6PDY0 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc85bQ6PDY0 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc85bQ6PDY0 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc85bQ6PDY0 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc85bQ6PDY0 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.31□□□□□ -0.44
Ccdc85bQ6PDY0 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc85bQ6PDY0 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.31□□□□□ -0.44
Ccdc85bQ6PDY0 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms